RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 CYP1A2P05177 515 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 PDHA1P08559 390 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 FECHP22830 423 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 CD1CP29017 333 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 GARSP41250 739 aaKnown RBP13.06□□□□□ -0.32
SPG7-221ENST00000569720 PPM1FP49593 454 aaPredicted RBP13.06□□□□□ -0.32
SPG7-221ENST00000569720 MMRN1Q13201 1228 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 LRP8Q14114 963 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 IFI16Q16666 785 aaKnown RBP13.06□□□□□ -0.32
SPG7-221ENST00000569720 GALNT13Q8IUC8 556 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 TMTC1Q8IUR5 882 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 MAP7D3Q8IWC1 876 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 RAVER1Q8IY67 606 aaKnown RBP13.06□□□□□ -0.32
SPG7-221ENST00000569720 CCDC170Q8IYT3 715 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 NRSN1Q8IZ57 195 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 NAGSQ8N159 534 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 TC2NQ8N9U0 490 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 KCTD6Q8NC69 237 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 EXD1Q8NHP7 514 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 PATE1Q8WXA2 126 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 SCARF2Q96GP6 870 aaPredicted RBP13.06□□□□□ -0.32
SPG7-221ENST00000569720 TAAR9Q96RI9 348 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 NUDT22Q9BRQ3 303 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 FAM117AQ9C073 453 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 ABHD10Q9NUJ1 306 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 KCNK4Q9NYG8 393 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 FOXJ2Q9P0K8 574 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 TMEM98Q9Y2Y6 226 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 TTLL3Q9Y4R7 772 aa13.06□□□□□ -0.32
SPG7-221ENST00000569720 HEMK1Q9Y5R4 338 aaPredicted RBP13.06□□□□□ -0.32
SPG7-221ENST00000569720 IGHV5-10-1A0A0J9YXX1 117 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.05□□□□□ -0.32
SPG7-221ENST00000569720 STMND1H3BQB6 276 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 SLC28A2O43868 658 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 MFSD11O43934 449 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 ASMTLO95671 621 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 SFTPCP11686 197 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 IL4RP24394 825 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 CCNCP24863 283 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 CSTF2P33240 577 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPG7-221ENST00000569720 GJC1P36383 396 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 ATP1A2P50993 1020 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 LIMK2P53671 638 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 GPLD1P80108 840 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 PTSQ03393 145 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 GALNT2Q10471 571 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 DPYSL3Q14195 570 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 PAFAH1B3Q15102 231 aaKnown RBP13.05□□□□□ -0.32
SPG7-221ENST00000569720 PDK2Q15119 407 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 PTPRRQ15256 657 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 ALG1LQ6GMV1 187 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 ALKBH5Q6P6C2 394 aaKnown RBP13.05□□□□□ -0.32
SPG7-221ENST00000569720 MARK2Q7KZI7 788 aaKnown RBP13.05□□□□□ -0.32
SPG7-221ENST00000569720 VASH2Q86V25 355 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 DTX1Q86Y01 620 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 TXLNBQ8N3L3 684 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPG7-221ENST00000569720 AGBL5Q8NDL9 886 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 RCBTB1Q8NDN9 531 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 OR4D9Q8NGE8 314 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 ZNF564Q8TBZ8 553 aaPredicted RBP13.05□□□□□ -0.32
SPG7-221ENST00000569720 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 PTCD2Q8WV60 388 aaKnown RBP13.05□□□□□ -0.32
SPG7-221ENST00000569720 CPLX3Q8WVH0 158 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 MAML1Q92585 1016 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 SCAMP4Q969E2 229 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 FATE1Q969F0 183 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 AHCYL2Q96HN2 611 aaKnown RBP13.05□□□□□ -0.32
SPG7-221ENST00000569720 CCDC74BQ96LY2 380 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 ZNF670Q9BS34 389 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
SPG7-221ENST00000569720 RBM22Q9NW64 420 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPG7-221ENST00000569720 SDK2Q58EX2 2172 aa13.05□□□□□ -0.32
SPG7-221ENST00000569720 IGHV1OR21-1A0A087WYE8 117 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 A0A087X0T9 212 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 PPM1DO15297 605 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 SOD1P00441 154 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 CD48P09326 243 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 FAM228BP0C875 321 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 CCL4P13236 92 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 MX2P20592 715 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 STC1P52823 247 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 RPL26P61254 145 aaKnown RBP13.04□□□□□ -0.32
SPG7-221ENST00000569720 DSC2Q02487 901 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 SRSF6Q13247 344 aaKnown RBP13.04□□□□□ -0.32
SPG7-221ENST00000569720 SQSTM1Q13501 440 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 PYCR3Q53H96 274 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 ANKRD20A8PQ5CZ79 823 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 ZFYVE27Q5T4F4 411 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 NKAIN2Q5VXU1 208 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 NCBP2-AS2Q69YL0 99 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 ZNF574Q6ZN55 896 aaPredicted RBP13.04□□□□□ -0.32
SPG7-221ENST00000569720 RFLNAQ6ZTI6 216 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 EXD3Q8N9H8 876 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 CCHCR1Q8TD31 782 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 EXTL1Q92935 676 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
SPG7-221ENST00000569720 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 SLC38A3Q99624 504 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 RIOK2Q9BVS4 552 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms