RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	PLD5	Q8N7P1	536 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNF248	Q8NDW4	579 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	THAP6	Q8TBB0	222 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	TMEM190	Q8WZ59	177 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	SLC41A2	Q96JW4	573 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	QRFPR	Q96P65	431 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	BBS4	Q96RK4	519 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	PYGO2	Q9BRQ0	406 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	H2AFJ	Q9BTM1	129 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	POLR3C	Q9BUI4	534 aa	Predicted RBP	3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	PPP1R3E	Q9H7J1	279 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	HINT3	Q9NQE9	182 aa	Known RBP	3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	C20orf141	Q9NUB4	165 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	C2orf42	Q9NWW7	574 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	HSPB7	Q9UBY9	170 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	POLG2	Q9UHN1	485 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	ERVK-11	Q9UQG0	969 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	DGKB	Q9Y6T7	804 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	CCDC196	A0A1B0GTZ2	297 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	SMIM1	B2RUZ4	78 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	EIF3F	O00303	357 aa	Predicted RBP	3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	BCAT2	O15382	392 aa	Predicted RBP	3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNHIT1	O43257	154 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	CYC1	P08574	325 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	IFIT1	P09914	478 aa	Known RBP	3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	LUM	P51884	338 aa	Predicted RBP	3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	EFNA5	P52803	228 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	CDH15	P55291	814 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	RNPS1	Q15287	305 aa	Known RBP	3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	NFIL3	Q16649	462 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	PRICKLE4	Q2TBC4	344 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	SLC45A4	Q5BKX6	768 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	SIRPB2	Q5JXA9	342 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	FAAP20	Q6NZ36	180 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	ATF7IP	Q6VMQ6	1270 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	ZBTB2	Q8N680	514 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	ANKRD42	Q8N9B4	389 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	OR2AK2	Q8NG84	335 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	HUS1B	Q8NHY5	278 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	HCAR2	Q8TDS4	363 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	MTERF1	Q99551	399 aa	Known RBP	3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	NUF2	Q9BZD4	464 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	GPR63	Q9BZJ6	419 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	NDST4	Q9H3R1	872 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	GPR108	Q9NPR9	543 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	MPP6	Q9NZW5	540 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNF624	Q9P2J8	865 aa	Predicted RBP	3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	TBX20	Q9UMR3	447 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	FAF1	Q9UNN5	650 aa	Predicted RBP	3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	OR2W1	Q9Y3N9	320 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	RNF215	Q9Y6U7	377 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	PTPRC	P08575	1304 aa		3.18	□□□□□ -1.9
UBR1-209	ENST00000569243	TACC1	O75410	805 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	IGLV1-44	P01699	117 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	FAM106CP	P0CH98	169 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	COX7A2	P14406	83 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	GNB1	P62873	340 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	CSNK2A1	P68400	391 aa	Predicted RBP	3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	RPL24	P83731	157 aa	Known RBP	3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	GRIK2	Q13002	908 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	TAF12	Q16514	161 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	BAK1	Q16611	211 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	TMEM35A	Q53FP2	167 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNF497	Q6ZNH5	498 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	DHX40	Q8IX18	779 aa	Known RBP	3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	CSNK2A3	Q8NEV1	391 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	TM9SF4	Q92544	642 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	UBXN10	Q96LJ8	280 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	BRF2	Q9HAW0	419 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	GJD2	Q9UKL4	321 aa		3.17	□□□□□ -1.9
UBR1-209	ENST00000569243	ZCWPW2	A0A1B0GU75	182 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243		A0A1W2PQM1	296 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	TTC36	A6NLP5	189 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	PSMD14	O00487	310 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	HOXC11	O43248	304 aa	Predicted RBP	3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	SEC14L5	O43304	696 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	ERVK-10	P10266	1014 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	NR1D1	P20393	614 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	EDN2	P20800	178 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	FOXM1	Q08050	763 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	PPP2R5B	Q15173	497 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	DECR1	Q16698	335 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	DUS1L	Q6P1R4	473 aa	Known RBP	3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	NOTCH2NL	Q7Z3S9	236 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	APLF	Q8IW19	511 aa	Predicted RBP	3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	PCDH20	Q8N6Y1	951 aa	Known RBP	3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	LRR1	Q96L50	414 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNF599	Q96NL3	588 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	CMKLR1	Q99788	373 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	IFIH1	Q9BYX4	1025 aa	Known RBP	3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	A4GNT	Q9UNA3	340 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	KCNK7	Q9Y2U2	307 aa		3.16	□□□□□ -1.9
UBR1-209	ENST00000569243	NR5A2	O00482	541 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	SPINT2	O43291	252 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	CAVIN2	O95810	425 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	FTCD	O95954	541 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	CHRNB4	P30926	498 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	HOXC8	P31273	242 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	NR2C2	P49116	596 aa		3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms