RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 PTPN7P35236 360 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 ADCY8P40145 1251 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 C14orf28Q4W4Y0 310 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 CCDC70Q6NSX1 233 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 DOK6Q6PKX4 331 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 KIAA1328Q86T90 577 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 TRIM74Q86UV6 250 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 C17orf82Q86X59 251 aaPredicted RBP20.17■□□□□ 0.82
CLK3-225ENST00000569063 HAUS1Q96CS2 278 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 SRPK1Q96SB4 655 aaKnown RBP20.17■□□□□ 0.82
CLK3-225ENST00000569063 CDH19Q9H159 772 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 SUDS3Q9H7L9 328 aaPredicted RBP20.17■□□□□ 0.82
CLK3-225ENST00000569063 TAAR2Q9P1P5 351 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 FAM153AQ9UHL3 310 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 ENTPD2Q9Y5L3 495 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 ST14Q9Y5Y6 855 aa20.17■□□□□ 0.82
CLK3-225ENST00000569063 A0A087WV48 116 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 LOC285095A0A1B0GVY8 99 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 B4DGG1 531 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 INPP4BO15327 924 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 NUDT21O43809 227 aaKnown RBP20.16■□□□□ 0.82
CLK3-225ENST00000569063 PMPCBO75439 489 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 EPOP01588 193 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 FGF1P05230 155 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 NFKB1P19838 968 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 LSSP48449 732 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 RWDD2BP57060 319 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 CTBSQ01459 385 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 PEX6Q13608 980 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 SPIDRQ14159 915 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 NOMO1Q15155 1222 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 PYCR3Q53H96 274 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 KDELC1Q6UW63 502 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 PID1Q7Z2X4 250 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 SFTPA2Q8IWL1 248 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 ZNF567Q8N184 647 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 TXLNBQ8N3L3 684 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 SPC24Q8NBT2 197 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 FCRL5Q96RD9 977 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 HERPUD2Q9BSE4 406 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 OSBPL8Q9BZF1 889 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 POLR1BQ9H9Y6 1135 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 RAD18Q9NS91 495 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 UBP1Q9NZI7 540 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 VPS18Q9P253 973 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 KLHL8Q9P2G9 620 aaPredicted RBP20.16■□□□□ 0.82
CLK3-225ENST00000569063 TRHDEQ9UKU6 1024 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 ZNF711Q9Y462 761 aa20.16■□□□□ 0.82
CLK3-225ENST00000569063 FADS2P1A8MWK0 482 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 DXOO77932 396 aaKnown RBP20.15■□□□□ 0.82
CLK3-225ENST00000569063 MPOP05164 745 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 PIRTP0C851 137 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 AK4P27144 223 aaPredicted RBP20.15■□□□□ 0.82
CLK3-225ENST00000569063 ACTN2P35609 894 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 DCDC1P59894 354 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 CCL7P80098 99 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 KIF5AQ12840 1032 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 LSMEM2Q8N112 164 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 ZDHHC1Q8WTX9 485 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 ALG3Q92685 438 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 ATXN7L3BQ96GX2 97 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 OR2M4Q96R27 311 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 LRIT1Q9P2V4 623 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 NFKBIL1Q9UBC1 381 aaPredicted RBP20.15■□□□□ 0.82
CLK3-225ENST00000569063 SHOC2Q9UQ13 582 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 RNF215Q9Y6U7 377 aa20.15■□□□□ 0.82
CLK3-225ENST00000569063 A0A1W2PQM1 296 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 TLX3O43711 291 aaPredicted RBP20.14■□□□□ 0.81
CLK3-225ENST00000569063 PDX1P52945 283 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 WNT3AP56704 352 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 GABREP78334 506 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 LRP8Q14114 963 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 TBC1D25Q3MII6 688 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 CCDC181Q5TID7 509 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 SLC30A9Q6PML9 568 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 CCNJLQ8IV13 435 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 GPR26Q8NDV2 337 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 SNIP1Q8TAD8 396 aaKnown RBP20.14■□□□□ 0.81
CLK3-225ENST00000569063 ACTL9Q8TC94 416 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 FGF11Q92914 225 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 MRGPRX2Q96LB1 330 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 GFM1Q96RP9 751 aaKnown RBP20.14■□□□□ 0.81
CLK3-225ENST00000569063 GPR63Q9BZJ6 419 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 LRRN3Q9H3W5 708 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 RMI1Q9H9A7 625 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 OAS3Q9Y6K5 1087 aaKnown RBP20.14■□□□□ 0.81
CLK3-225ENST00000569063 RP1P56715 2156 aa20.14■□□□□ 0.81
CLK3-225ENST00000569063 H7C0C1 242 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 DNAJC6O75061 913 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 ASMTLO95671 621 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 ATP1A1P05023 1023 aaKnown RBP20.13■□□□□ 0.81
CLK3-225ENST00000569063 RPLP0P05388 317 aaKnown RBP20.13■□□□□ 0.81
CLK3-225ENST00000569063 PYGMP11217 842 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 RBL1P28749 1068 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 EIF2S3P41091 472 aaKnown RBP20.13■□□□□ 0.81
CLK3-225ENST00000569063 CETN2P41208 172 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 ATP5OP48047 213 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 OTUD4Q01804 1114 aaKnown RBP20.13■□□□□ 0.81
CLK3-225ENST00000569063 MPP3Q13368 585 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 PDPK2PQ6A1A2 396 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms