RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 YY2O15391 372 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 DKK1O94907 266 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 IFNB1P01574 187 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 FUCA1P04066 466 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 CTSEP14091 401 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 CKMT2P17540 419 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 PMLP29590 882 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 ELOCQ15369 112 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 DEFB133Q30KQ1 61 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 DENND5AQ6IQ26 1287 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 GLT6D1Q7Z4J2 308 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 PNPLA1Q8N8W4 532 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 FAM181AQ8N9Y4 354 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 LRRC45Q96CN5 670 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 ARNT2Q9HBZ2 717 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 HOMER3Q9NSC5 361 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 MOSPD1Q9UJG1 213 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 LRP4O75096 1905 aa21.51■■□□□ 1.03
NME3-210ENST00000567271 INPP4BO15327 924 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 PSMD3O43242 534 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 USP12O75317 370 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 TRIM16O95361 564 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 CELA2BP08218 269 aaPredicted RBP21.5■■□□□ 1.03
NME3-210ENST00000567271 POLD2P49005 469 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 DNAJC3Q13217 504 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 MSLNQ13421 630 aaPredicted RBP21.5■■□□□ 1.03
NME3-210ENST00000567271 ALS2CLQ60I27 953 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 SDR16C5Q8N3Y7 309 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 TAB3Q8N5C8 712 aaPredicted RBP21.5■■□□□ 1.03
NME3-210ENST00000567271 TRAM1L1Q8N609 369 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 PDCD7Q8N8D1 485 aaKnown RBP21.5■■□□□ 1.03
NME3-210ENST00000567271 PRELID2Q8N945 189 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 PTCD2Q8WV60 388 aaKnown RBP21.5■■□□□ 1.03
NME3-210ENST00000567271 MS4A14Q96JA4 679 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 ZSCAN5AQ9BUG6 496 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 SPATA16Q9BXB7 569 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 LRRC40Q9H9A6 602 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 BPIFA1Q9NP55 256 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 IL17CQ9P0M4 197 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 TTC7AQ9ULT0 858 aaPredicted RBP21.5■■□□□ 1.03
NME3-210ENST00000567271 TMEM98Q9Y2Y6 226 aa21.5■■□□□ 1.03
NME3-210ENST00000567271 SPEGQ15772 3267 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 AP2A1O95782 977 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 IVLP07476 585 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 ANXA6P08133 673 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 ETS1P14921 441 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 FOXC1Q12948 553 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 ZCCHC8Q6NZY4 707 aaKnown RBP21.49■■□□□ 1.03
NME3-210ENST00000567271 DOK6Q6PKX4 331 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 PRUNE1Q86TP1 453 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 TRIM74Q86UV6 250 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 CCDC89Q8N998 374 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 GLIS1Q8NBF1 620 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 SCARF2Q96GP6 870 aaPredicted RBP21.49■■□□□ 1.03
NME3-210ENST00000567271 APOLD1Q96LR9 279 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 PLEKHG4BQ96PX9 1271 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 OSBPL9Q96SU4 736 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 TMEM168Q9H0V1 697 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 CARS2Q9HA77 564 aaKnown RBP21.49■■□□□ 1.03
NME3-210ENST00000567271 FEZ2Q9UHY8 353 aaPredicted RBP21.49■■□□□ 1.03
NME3-210ENST00000567271 SUFUQ9UMX1 484 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 WASF3Q9UPY6 502 aa21.49■■□□□ 1.03
NME3-210ENST00000567271 CKMT1AP12532 417 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 ACP1P24666 158 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 ACTN2P35609 894 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 FDFT1P37268 417 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 ACADVLP49748 655 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 TCEA2Q15560 299 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 PDPK2PQ6A1A2 396 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 LVRNQ6Q4G3 990 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 GKN2Q86XP6 184 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 COG1Q8WTW3 980 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 ADAMTS14Q8WXS8 1223 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 BOCQ9BWV1 1114 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 ETNK1Q9HBU6 452 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 IL26Q9NPH9 171 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 SNX12Q9UMY4 172 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 PCDHGA1Q9Y5H4 931 aa21.48■■□□□ 1.03
NME3-210ENST00000567271 OAS3Q9Y6K5 1087 aaKnown RBP21.48■■□□□ 1.03
NME3-210ENST00000567271 LY6G6EA0A0G2JKS1 128 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 BUD23O43709 281 aaKnown RBP21.47■■□□□ 1.03
NME3-210ENST00000567271 PPFIA2O75334 1257 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 ZSCAN5DPP0CG00 497 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 MYF5P13349 255 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 GNPDA1P46926 289 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 KCNJ1P48048 391 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 DAB2P98082 770 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 TAF1AQ15573 450 aaPredicted RBP21.47■■□□□ 1.03
NME3-210ENST00000567271 C6orf132Q5T0Z8 1188 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 ZDHHC20Q5W0Z9 365 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 RAB44Q7Z6P3 723 aaPredicted RBP21.47■■□□□ 1.03
NME3-210ENST00000567271 DTX3LQ8TDB6 740 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 BRSK1Q8TDC3 778 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 SCG3Q8WXD2 468 aaKnown RBP21.47■■□□□ 1.03
NME3-210ENST00000567271 TRNAU1APQ9NX07 287 aaKnown RBP21.47■■□□□ 1.03
NME3-210ENST00000567271 VPS18Q9P253 973 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 PAK5Q9P286 719 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 DOLKQ9UPQ8 538 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 PKP3Q9Y446 797 aa21.47■■□□□ 1.03
NME3-210ENST00000567271 ARL5AQ9Y689 179 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms