RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TMEM98Q9Y2Y6 226 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 LUC7L2Q9Y383 392 aaKnown RBP14.91□□□□□ -0.02
RNF40-209ENST00000566703 STMND1H3BQB6 276 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 MFSD11O43934 449 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 PRLP01236 227 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 CD48P09326 243 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 FGF3P11487 239 aaPredicted RBP14.9□□□□□ -0.02
RNF40-209ENST00000566703 CCL4P13236 92 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 DSC2Q02487 901 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 ANKRD20A8PQ5CZ79 823 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 GALNT13Q8IUC8 556 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 ARRDC2Q8TBH0 407 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 PATE1Q8WXA2 126 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 FAF2Q96CS3 445 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 CCDC74BQ96LY2 380 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 ARHGAP9Q9BRR9 750 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 DDA1Q9BW61 102 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 TDRD1Q9BXT4 1180 aaKnown RBP14.9□□□□□ -0.02
RNF40-209ENST00000566703 RMI1Q9H9A7 625 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 KCNK4Q9NYG8 393 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 VPS18Q9P253 973 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 UVRAGQ9P2Y5 699 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 CD84Q9UIB8 345 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 CHKBQ9Y259 395 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 PCDHGA4Q9Y5G9 962 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 COL6A6A6NMZ7 2263 aa14.9□□□□□ -0.02
RNF40-209ENST00000566703 ARHGEF17Q96PE2 2063 aaPredicted RBP14.89□□□□□ -0.03
RNF40-209ENST00000566703 PROSCO94903 275 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 KRT7P08729 469 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 THRAP10827 490 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 CSTF2P33240 577 aaKnown RBP eCLIP14.89□□□□□ -0.03
RNF40-209ENST00000566703 ATP1A2P50993 1020 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 IHHQ14623 411 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 ATP13A4Q4VNC1 1196 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 DOK6Q6PKX4 331 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 SFRP1Q8N474 314 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 ZNF564Q8TBZ8 553 aaPredicted RBP14.89□□□□□ -0.03
RNF40-209ENST00000566703 SH3KBP1Q96B97 665 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 AGAP2Q99490 1192 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 RIOK2Q9BVS4 552 aaKnown RBP14.89□□□□□ -0.03
RNF40-209ENST00000566703 ASPSCR1Q9BZE9 553 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 CBX8Q9HC52 389 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 PCDH9Q9HC56 1237 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 NENFQ9UMX5 172 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 PLEKHM1Q9Y4G2 1056 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 SCN8AQ9UQD0 1980 aa14.89□□□□□ -0.03
RNF40-209ENST00000566703 A0A0U1RQS6 177 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 B4E171 279 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 AGRPO00253 132 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 DNAJC6O75061 913 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 CLDN7O95471 211 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 ASMTLO95671 621 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 H2AFZP0C0S5 128 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 HNRNPH3P31942 346 aaKnown RBP14.88□□□□□ -0.03
RNF40-209ENST00000566703 TSPAN7P41732 249 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 SPINT3P49223 89 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 NIPAL4Q0D2K0 466 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 SRSF6Q13247 344 aaKnown RBP14.88□□□□□ -0.03
RNF40-209ENST00000566703 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.88□□□□□ -0.03
RNF40-209ENST00000566703 NKAIN2Q5VXU1 208 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 H2AFVQ71UI9 128 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 RCBTB1Q8NDN9 531 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 OR10G6Q8NH81 332 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 CCHCR1Q8TD31 782 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 SLC37A2Q8TED4 501 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 CPLX3Q8WVH0 158 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 EXTL1Q92935 676 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 NKD1Q969G9 470 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 HDAC11Q96DB2 347 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 AHCYL2Q96HN2 611 aaKnown RBP14.88□□□□□ -0.03
RNF40-209ENST00000566703 SMIM14Q96QK8 99 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 WDR24Q96S15 920 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 SLC38A3Q99624 504 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 MLPHQ9BV36 600 aaPredicted RBP14.88□□□□□ -0.03
RNF40-209ENST00000566703 FAM117AQ9C073 453 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 FAM83DQ9H4H8 585 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 SARS2Q9NP81 518 aaKnown RBP14.88□□□□□ -0.03
RNF40-209ENST00000566703 STARD5Q9NSY2 213 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 ZNHIT2Q9UHR6 403 aa14.88□□□□□ -0.03
RNF40-209ENST00000566703 CNOT6Q9ULM6 557 aaKnown RBP14.88□□□□□ -0.03
RNF40-209ENST00000566703 SMG1Q96Q15 3661 aaKnown RBP14.88□□□□□ -0.03
RNF40-209ENST00000566703 OR5K4A6NMS3 321 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 ZNF487B1APH4 448 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 ANKRD66B4E2M5 251 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 INPP4BO15327 924 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 SLC28A2O43868 658 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 SLC2A4P14672 509 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 ITGB6P18564 788 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 CLCNKAP51800 687 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 RAB15P59190 212 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 TBR1Q16650 682 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 HENMT1Q5T8I9 393 aaKnown RBP14.87□□□□□ -0.03
RNF40-209ENST00000566703 IYDQ6PHW0 289 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 WDR74Q6RFH5 385 aaPredicted RBP14.87□□□□□ -0.03
RNF40-209ENST00000566703 MARK2Q7KZI7 788 aaKnown RBP14.87□□□□□ -0.03
RNF40-209ENST00000566703 TRIM74Q86UV6 250 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 VASH2Q86V25 355 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 LUZP1Q86V48 1076 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 CCDC13Q8IYE1 715 aa14.87□□□□□ -0.03
RNF40-209ENST00000566703 PQLC3Q8N755 202 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms