RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 INO80CQ6PI98 192 aaPredicted RBP18.22■□□□□ 0.51
USB1-213ENST00000566292 NRSN1Q8IZ57 195 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 CNTD1Q8N815 330 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 OR2M4Q96R27 311 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 RDH14Q9HBH5 336 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 ABHD10Q9NUJ1 306 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 SPTLC3Q9NUV7 552 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 HAUS2Q9NVX0 235 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 DNPEPQ9ULA0 475 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 LRRD1A4D1F6 860 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 RHPN2P1A8MT19 583 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 INPP4BO15327 924 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 CPNE6O95741 557 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 PYGLP06737 847 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 JMJD7P0C870 316 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 CA4P22748 312 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 ALDH4A1P30038 563 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 ACTR1BP42025 376 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 CD86P42081 329 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 ACTR1AP61163 376 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 RPL26P61254 145 aaKnown RBP18.21■□□□□ 0.51
USB1-213ENST00000566292 IFI35P80217 286 aaPredicted RBP18.21■□□□□ 0.51
USB1-213ENST00000566292 RHDQ02161 417 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 QPCTQ16769 361 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 AMZ1Q400G9 498 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 MAP9Q49MG5 647 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 PYCR3Q53H96 274 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 PHF19Q5T6S3 580 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 SLC9A4Q6AI14 798 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 ZNF574Q6ZN55 896 aaPredicted RBP18.21■□□□□ 0.51
USB1-213ENST00000566292 MARK2Q7KZI7 788 aaKnown RBP18.21■□□□□ 0.51
USB1-213ENST00000566292 VSTM4Q8IW00 320 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 EXD1Q8NHP7 514 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 NUDT22Q9BRQ3 303 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 CDH19Q9H159 772 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 ZNHIT6Q9NWK9 470 aaKnown RBP18.21■□□□□ 0.51
USB1-213ENST00000566292 ACSL6Q9UKU0 697 aa18.21■□□□□ 0.51
USB1-213ENST00000566292 CNOT6Q9ULM6 557 aaKnown RBP18.21■□□□□ 0.51
USB1-213ENST00000566292 RPL26L1Q9UNX3 145 aaKnown RBP18.21■□□□□ 0.51
USB1-213ENST00000566292 PCYT1BQ9Y5K3 369 aaPredicted RBP18.21■□□□□ 0.51
USB1-213ENST00000566292 ZNF487B1APH4 448 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 PPM1DO15297 605 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 NVLO15381 856 aaKnown RBP18.2■□□□□ 0.5
USB1-213ENST00000566292 MFAP3LO75121 409 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 MTA2O94776 668 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 C19orf57Q0VDD7 668 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 C16orf72Q14CZ0 275 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 NPNTQ6UXI9 565 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 USP53Q70EK8 1073 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 PIM3Q86V86 326 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 RAVER1Q8IY67 606 aaKnown RBP18.2■□□□□ 0.5
USB1-213ENST00000566292 TTC9Q92623 222 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 TMEM159Q96B96 161 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 ZNF830Q96NB3 372 aaPredicted RBP18.2■□□□□ 0.5
USB1-213ENST00000566292 NHEJ1Q9H9Q4 299 aaPredicted RBP18.2■□□□□ 0.5
USB1-213ENST00000566292 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.2■□□□□ 0.5
USB1-213ENST00000566292 HEY1Q9Y5J3 304 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 OAS3Q9Y6K5 1087 aaKnown RBP18.2■□□□□ 0.5
USB1-213ENST00000566292 COL6A6A6NMZ7 2263 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 SDK2Q58EX2 2172 aa18.2■□□□□ 0.5
USB1-213ENST00000566292 C1orf232A0A0U1RR37 186 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 FADS2P1A8MWK0 482 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 ANKRD66B4E2M5 251 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 EFSO43281 561 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 DNAJC6O75061 913 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 ATP1A1P05023 1023 aaKnown RBP18.19■□□□□ 0.5
USB1-213ENST00000566292 CD1CP29017 333 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 ARHGAP25P42331 645 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 GPR3P46089 330 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 SPINT3P49223 89 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 TGIF1Q15583 401 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 TAF1BQ53T94 588 aaPredicted RBP18.19■□□□□ 0.5
USB1-213ENST00000566292 HENMT1Q5T8I9 393 aaKnown RBP18.19■□□□□ 0.5
USB1-213ENST00000566292 CCDC81Q6ZN84 652 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 VSIG1Q86XK7 387 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 GALNT13Q8IUC8 556 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 ZNF843Q8N446 348 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 CCNL2Q96S94 520 aaPredicted RBP18.19■□□□□ 0.5
USB1-213ENST00000566292 CMKLR1Q99788 373 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 MLPHQ9BV36 600 aaPredicted RBP18.19■□□□□ 0.5
USB1-213ENST00000566292 CEP41Q9BYV8 373 aa18.19■□□□□ 0.5
USB1-213ENST00000566292 PIEZO2Q9H5I5 2752 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 PRAMEF33A0A0G2JMD5 474 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 APOL1O14791 398 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 PRAMEF10O60809 474 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 ASMTLO95671 621 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 EML2O95834 649 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 MAPK10P53779 464 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 CFHR1Q03591 330 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 AP1B1Q10567 949 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 SRSF6Q13247 344 aaKnown RBP18.18■□□□□ 0.5
USB1-213ENST00000566292 PEX6Q13608 980 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 GALNT3Q14435 633 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 SKOR2Q2VWA4 1001 aaPredicted RBP18.18■□□□□ 0.5
USB1-213ENST00000566292 NKAIN2Q5VXU1 208 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 KIAA1614Q5VZ46 1190 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 RHOT2Q8IXI1 618 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 RCBTB1Q8NDN9 531 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.18■□□□□ 0.5
USB1-213ENST00000566292 USP7Q93009 1102 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms