RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 UROC1Q96N76 676 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 NSUN5Q96P11 429 aaKnown RBP7.24□□□□□ -1.25
SMG1-210ENST00000565224 KCNA7Q96RP8 456 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 ATOH8Q96SQ7 321 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 PTPN18Q99952 460 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 TRIM54Q9BYV2 358 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 MUC13Q9H3R2 512 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 TUBB1Q9H4B7 451 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMG1-210ENST00000565224 POLG2Q9UHN1 485 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 CPA4Q9UI42 421 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 SCML2Q9UQR0 700 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 PCDHA9Q9Y5H5 950 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 GMEB1Q9Y692 573 aa7.24□□□□□ -1.25
SMG1-210ENST00000565224 A0A0J9YVX5 310 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 RNF103-CHMP3A0A140T963 221 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CCDC162PA2VCL2 907 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 SUPT3HB4E1H0 165 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 TPST1O60507 370 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 KERAO60938 352 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CLASP2O75122 1294 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 SUPT3HO75486 399 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CRCPO75575 148 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 RASAL1O95294 804 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 FGF1P05230 155 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 ITGB1P05556 798 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 PYGLP06737 847 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 GNAO1P09471 354 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 LINC00032P0C843 101 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 HLA-DPA1P20036 260 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CHRM3P20309 590 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 EEF1DP29692 281 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 CCT8P50990 548 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 YWHAHQ04917 246 aaPredicted RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 CACNB2Q08289 660 aaPredicted RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 IL10RBQ08334 325 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 SEMA3AQ14563 771 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 TBC1D25Q3MII6 688 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 SLC36A3Q495N2 470 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 ZBED5Q49AG3 693 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 IL31Q6EBC2 164 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 SPRED1Q7Z699 444 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 MON1AQ86VX9 555 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CMTR2Q8IYT2 770 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 DCP1BQ8IZD4 617 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 TRPV3Q8NET8 790 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 OR4L1Q8NH43 312 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 ADAMTS16Q8TE57 1224 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 TSPEARQ8WU66 669 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 KIAA1191Q96A73 305 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 SEMA3CQ99985 751 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 AARSD1Q9BTE6 412 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 POLR1EQ9GZS1 481 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 LIN28AQ9H9Z2 209 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 SLC52A3Q9NQ40 469 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CATSPERZQ9NTU4 200 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 BTRCQ9Y297 605 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 GPR45Q9Y5Y3 372 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 ARL5AQ9Y689 179 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 LAMA3Q16787 3333 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 IGLV3-10A0A075B6K4 115 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 A0A1W2PP18 115 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 MYADML2A6NDP7 307 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 TRIM64A6NGJ6 449 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 ZNF701M0R085 212 aaPredicted RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 MGEA5O60502 916 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 RAMP2O60895 175 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 PFDN1O60925 122 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 OR4Q2P0C623 313 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 RPL10P27635 214 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 OXTRP30559 389 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CD52P31358 61 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 PBX3P40426 434 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 MRPL19P49406 292 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 GSK3BP49841 420 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 STC1P52823 247 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 ADARP55265 1226 aaKnown RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 NUP107P57740 925 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 KCNK10P57789 538 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CLCQ05315 142 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 MGAT3Q09327 533 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 NFYCQ13952 458 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 PTPRCAPQ14761 206 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 POLD3Q15054 466 aaPredicted RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 CYP51A1Q16850 503 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 TYSND1Q2T9J0 566 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 PARP15Q460N3 678 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 SLC39A12Q504Y0 691 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 TMTC4Q5T4D3 741 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 SDHAF4Q5VUM1 108 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 GDF6Q6KF10 455 aaPredicted RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 OGFOD2Q6N063 350 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 FBXL22Q6P050 247 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 DHRS4L2Q6PKH6 230 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 SPATA19Q7Z5L4 167 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 CLVS1Q8IUQ0 354 aaPredicted RBP7.23□□□□□ -1.25
SMG1-210ENST00000565224 FBXO39Q8N4B4 442 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 ATP6V0D2Q8N8Y2 350 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 OR13C4Q8NGS5 318 aa7.23□□□□□ -1.25
SMG1-210ENST00000565224 STAG3L4Q8TBR4 150 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms