RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 AKAP14Q86UN6 197 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 SCML4Q8N228 414 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 TRPV3Q8NET8 790 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 SLC25A23Q9BV35 468 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 LRRC40Q9H9A6 602 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 GOLGA2P5Q9HBQ8 144 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 CHST12Q9NRB3 414 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 BAG5Q9UL15 447 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 ABT1Q9ULW3 272 aaKnown RBP16.25■□□□□ 0.19
LINC00554-201ENST00000564841 MTF2Q9Y483 593 aaPredicted RBP16.25■□□□□ 0.19
LINC00554-201ENST00000564841 TRPC5OSA6NMA1 111 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 SLCO1B7G3V0H7 640 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 ABCB7O75027 752 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 SOWAHAQ2M3V2 549 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 ADPRMQ3LIE5 342 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 SPATC1Q76KD6 591 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 TMEM40Q8WWA1 233 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 ITCHQ96J02 903 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 TMEM74Q96NL1 305 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 SLC30A3Q99726 388 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 DSEQ9UL01 958 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 PCDHGA8Q9Y5G5 932 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 PLXNB2O15031 1838 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 MGAMO43451 1857 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 PPP6CO00743 305 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 HUS1O60921 280 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 KCNK2O95069 426 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 UGT2B4P06133 528 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CHRNB1P11230 501 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 GFAPP14136 432 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CRHBPP24387 322 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 IGFBP6P24592 240 aaPredicted RBP16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CXCR2P25025 360 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 LMO2P25791 158 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 RFC2P35250 354 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 TUFMP49411 452 aaKnown RBP16.24■□□□□ 0.19
LINC00554-201ENST00000564841 SURF1Q15526 300 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 RFPL4BQ6ZWI9 263 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 ZC3HC1Q86WB0 502 aaKnown RBP16.24■□□□□ 0.19
LINC00554-201ENST00000564841 ELMO1Q92556 727 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 GPR78Q96P69 363 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CLSTN3Q9BQT9 956 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 ARHGAP39Q9C0H5 1083 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 A0A0J9YYE9 177 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 TNFRSF10AO00220 468 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 AGRPO00253 132 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 PTPN2P17706 415 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 ITGB6P18564 788 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 SERPINB1P30740 379 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CASP2P42575 452 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 GP2P55259 537 aaKnown RBP16.24■□□□□ 0.19
LINC00554-201ENST00000564841 NAB1Q13506 487 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 TMEM135Q86UB9 458 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 GALNT13Q8IUC8 556 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 ATP6V0D2Q8N8Y2 350 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 PDPRQ8NCN5 879 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 HEXDCQ8WVB3 486 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 GLMNQ92990 594 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 RNF145Q96MT1 663 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 NEK6Q9HC98 313 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 SLAMF8Q9P0V8 285 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 KLHL8Q9P2G9 620 aaPredicted RBP16.24■□□□□ 0.19
LINC00554-201ENST00000564841 PCDHB3Q9Y5E6 796 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 SNPHO15079 494 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 NOBOXO60393 691 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CLK3P49761 638 aaKnown RBP16.24■□□□□ 0.19
LINC00554-201ENST00000564841 ECT2LQ008S8 904 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CCDC58Q4VC31 144 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 FAM45BPQ6NSW5 357 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 LINC00523Q86TU6 105 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CUZD1Q86UP6 607 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 FAM45AQ8TCE6 357 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CALML6Q8TD86 181 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 NRBF2Q96F24 287 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 SPATA17Q96L03 361 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 CEP295NLQ96MC4 621 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 NT5C1AQ9BXI3 368 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
LINC00554-201ENST00000564841 H3BMM5 538 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 FXYD1O00168 92 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 UBFD1O14562 309 aaKnown RBP16.23■□□□□ 0.19
LINC00554-201ENST00000564841 UGT2B11O75310 529 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 DLGAP3O95886 979 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 VDRP11473 427 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 CDH13P55290 713 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 NCS1P62166 190 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 DGCR6Q14129 220 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 CSHL1Q14406 222 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 MFSD10Q14728 455 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 CYP2U1Q7Z449 544 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 ELMOD1Q8N336 334 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 VPS33AQ96AX1 596 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 CENPOQ9BU64 300 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 SMURF2Q9HAU4 748 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 PARVBQ9HBI1 364 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 BFARQ9NZS9 450 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 ACOT9Q9Y305 439 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 UGT2A1Q9Y4X1 527 aa16.23■□□□□ 0.19
LINC00554-201ENST00000564841 LRRC37A2A6NM11 1700 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms