RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PRAMEF33A0A0G2JMD5 474 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 A0A0U1RQS6 177 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 GOLGA6CA6NDK9 693 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 GOLGA6BA6NDN3 693 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 RHPN2P1A8MT19 583 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 APOL1O14791 398 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 PRAMEF10O60809 474 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 CPNE6O95741 557 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 GOLGA6DP0CG33 693 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 LIPCP11150 499 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 KRT10P13645 584 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 ALDH4A1P30038 563 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 ADCY8P40145 1251 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 ETV5P41161 510 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 MAGEA1P43355 309 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 NOP2P46087 812 aaKnown RBP18.41■□□□□ 0.54
CLN6-204ENST00000564752 ZNF75DP51815 510 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 DSC2Q02487 901 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 PTSQ03393 145 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 TCEAL1Q15170 157 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 CLPPQ16740 277 aaPredicted RBP18.41■□□□□ 0.54
CLN6-204ENST00000564752 AMZ1Q400G9 498 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 ALG1LQ6GMV1 187 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 RFLNAQ6ZTI6 216 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 NLRP8Q86W28 1048 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 CCDC13Q8IYE1 715 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 NDUFAF2Q8N183 169 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.41■□□□□ 0.54
CLN6-204ENST00000564752 LRRN4Q8WUT4 740 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 MRFAP1L1Q96HT8 127 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 MAK16Q9BXY0 300 aaKnown RBP18.41■□□□□ 0.54
CLN6-204ENST00000564752 ABCG8Q9H221 673 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 RDH14Q9HBH5 336 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 DDX56Q9NY93 547 aaKnown RBP18.41■□□□□ 0.54
CLN6-204ENST00000564752 GOLGA6AQ9NYA3 693 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 HYOU1Q9Y4L1 999 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 HEY1Q9Y5J3 304 aa18.41■□□□□ 0.54
CLN6-204ENST00000564752 AGRPO00253 132 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 ZW10O43264 779 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 SOD1P00441 154 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 HLA-DQB2P05538 268 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 COMTP21964 271 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 CA4P22748 312 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 CES1P23141 567 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 CYLC1P35663 651 aaPredicted RBP18.4■□□□□ 0.54
CLN6-204ENST00000564752 GPR1P46091 355 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 SLC10A2Q12908 348 aaPredicted RBP18.4■□□□□ 0.54
CLN6-204ENST00000564752 PEX6Q13608 980 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 IHHQ14623 411 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 SPA17Q15506 151 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 PHF19Q5T6S3 580 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 LRRC66Q68CR7 880 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 SLC9A4Q6AI14 798 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 SLC30A9Q6PML9 568 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 ADAMTSL4Q6UY14 1074 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 ZNF574Q6ZN55 896 aaPredicted RBP18.4■□□□□ 0.54
CLN6-204ENST00000564752 USP53Q70EK8 1073 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 CCDC170Q8IYT3 715 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 NAGSQ8N159 534 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 PLD5Q8N7P1 536 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 USP7Q93009 1102 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 MED8Q96G25 268 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 SMIM14Q96QK8 99 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 B3GNT4Q9C0J1 378 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 LUC7LQ9NQ29 371 aaKnown RBP18.4■□□□□ 0.54
CLN6-204ENST00000564752 WDR70Q9NW82 654 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 CD84Q9UIB8 345 aa18.4■□□□□ 0.54
CLN6-204ENST00000564752 ARHGEF17Q96PE2 2063 aaPredicted RBP18.39■□□□□ 0.53
CLN6-204ENST00000564752 A0A0J9YYE9 177 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 C3orf70A6NLC5 250 aaPredicted RBP18.39■□□□□ 0.53
CLN6-204ENST00000564752 C9orf172C9J069 976 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 J3QKU1 62 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 TRBC1P01850 177 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 ZNF30P17039 623 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 CD1CP29017 333 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 GPR3P46089 330 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 MAPK10P53779 464 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 EPHB1P54762 984 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 PPIDQ08752 370 aaKnown RBP18.39■□□□□ 0.53
CLN6-204ENST00000564752 SRSF6Q13247 344 aaKnown RBP18.39■□□□□ 0.53
CLN6-204ENST00000564752 C16orf72Q14CZ0 275 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 MAP9Q49MG5 647 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 ZFAND4Q86XD8 727 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 RFX6Q8HWS3 928 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 PATE1Q8WXA2 126 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 SCAMP4Q969E2 229 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 RNF25Q96BH1 459 aaPredicted RBP18.39■□□□□ 0.53
CLN6-204ENST00000564752 AP2M1Q96CW1 435 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 NUDT22Q9BRQ3 303 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 FOXJ2Q9P0K8 574 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 SEPT10Q9P0V9 454 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 TMEM98Q9Y2Y6 226 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 PLEKHM1Q9Y4G2 1056 aa18.39■□□□□ 0.53
CLN6-204ENST00000564752 B8ZZF3 427 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 KCNK1O00180 336 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 PPP1R12AO14974 1030 aaPredicted RBP18.38■□□□□ 0.53
CLN6-204ENST00000564752 PPM1DO15297 605 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 PSTPIP1O43586 416 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 LCA5LO95447 670 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 ZFXP17010 805 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms