RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 F7P08709 466 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-210ENST00000564587 FGF3P11487 239 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-210ENST00000564587 RPS3P23396 243 aaKnown RBP eCLIP15.49■□□□□ 0.07
COMMD4-210ENST00000564587 VIPR1P32241 457 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 SLC6A11P48066 632 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 HNRNPH2P55795 449 aaKnown RBP15.49■□□□□ 0.07
COMMD4-210ENST00000564587 HNRNPA1L2Q32P51 320 aaKnown RBP15.49■□□□□ 0.07
COMMD4-210ENST00000564587 ITPRIPL2Q3MIP1 535 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 FNDC3BQ53EP0 1204 aaKnown RBP15.49■□□□□ 0.07
COMMD4-210ENST00000564587 ARSIQ5FYB1 569 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 FOXR1Q6PIV2 292 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 DSG4Q86SJ6 1040 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 ZSWIM9Q86XI8 627 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 C10orf107Q8IVU9 208 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 RBFAQ8N0V3 343 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 FSTL5Q8N475 847 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-210ENST00000564587 GBP7Q8N8V2 638 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-210ENST00000564587 OR8D1Q8WZ84 308 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 PBXIP1Q96AQ6 731 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 NXNL1Q96CM4 212 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 GPR78Q96P69 363 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 SMIM14Q96QK8 99 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 MECRQ9BV79 373 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 ZNF358Q9NW07 568 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 OXSMQ9NWU1 459 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 CLDND1Q9NY35 253 aa15.49■□□□□ 0.07
COMMD4-210ENST00000564587 ZNF106Q9H2Y7 1883 aaKnown RBP15.48■□□□□ 0.07
COMMD4-210ENST00000564587 TRBV5-4A0A0C4DH59 114 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 TBC1D3BA6NDS4 549 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 NPIPB15A6NHN6 443 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-210ENST00000564587 PRRT4C9JH25 899 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 G3V2L1 256 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 PRMT5O14744 637 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-210ENST00000564587 LEFTY1O75610 366 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 DCTN3O75935 186 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 PRAMEF1O95521 474 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 APODP05090 189 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 CCDC166P0CW27 439 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 BPIP17213 487 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 KCNA4P22459 653 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 FMO4P31512 558 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 GJA4P35212 333 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 SERPINB5P36952 375 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 GRIA2P42262 883 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 ATP6V0D1P61421 351 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 OCRLQ01968 901 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 IFT88Q13099 833 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 ITGA9Q13797 1035 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 CSHL1Q14406 222 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 COL19A1Q14993 1142 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 LIPMQ5VYY2 423 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 LRRC66Q68CR7 880 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 CGB2Q6NT52 195 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 PSAPL1Q6NUJ1 521 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 GPR153Q6NV75 609 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 ERAP2Q6P179 960 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 ZNF549Q6P9A3 640 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 CCDC121Q6ZUS5 278 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 PHTF2Q8N3S3 785 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 NKAPQ8N5F7 415 aaKnown RBP15.48■□□□□ 0.07
COMMD4-210ENST00000564587 HEXDCQ8WVB3 486 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 SORCS1Q8WY21 1168 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 KCNJ9Q92806 393 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 EID2BQ96D98 161 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 PPP1R16AQ96I34 528 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 MSLNLQ96KJ4 702 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 ASB8Q9H765 288 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 IL26Q9NPH9 171 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 PRDM6Q9NQX0 595 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 IGSF5Q9NSI5 407 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 NFKBIL1Q9UBC1 381 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-210ENST00000564587 EPS15L1Q9UBC2 864 aa15.48■□□□□ 0.07
COMMD4-210ENST00000564587 KIAA1549LQ6ZVL6 1849 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 CCT8L1PA6NM43 557 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 AGAP14A8MT82 685 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 TARM1B6A8C7 271 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 TBX10O75333 385 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 ATP5F1P24539 256 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-210ENST00000564587 GDI1P31150 447 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 OPRD1P41143 372 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 SLC1A6P48664 564 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 HK2P52789 917 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 CDKN2DP55273 166 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 DNAJB13P59910 316 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 KDSRQ06136 332 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 NFATC2Q13469 925 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 ELAVL3Q14576 367 aaKnown RBP15.47■□□□□ 0.07
COMMD4-210ENST00000564587 LRIT3Q3SXY7 679 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 DENND4AQ7Z401 1863 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 SLC22A9Q8IVM8 553 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 PIANPQ8IYJ0 282 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 KIRREL3Q8IZU9 778 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 OR6Y1Q8NGX8 325 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 RHEBL1Q8TAI7 183 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 SUSD6Q92537 303 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 PLA2G2FQ9BZM2 168 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 CLPBQ9H078 707 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 KDM4CQ9H3R0 1056 aa15.47■□□□□ 0.07
COMMD4-210ENST00000564587 TFB2MQ9H5Q4 396 aaKnown RBP15.47■□□□□ 0.07
COMMD4-210ENST00000564587 THAP10Q9P2Z0 257 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms