RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	SLC2A4	P14672	509 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	PPIB	P23284	216 aa	Known RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	ALDH3A2	P51648	485 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	PMS2P3	Q13401	168 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	TBRG1	Q3YBR2	411 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	ILDR2	Q71H61	639 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	FAR1	Q8WVX9	515 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	LPIN3	Q9BQK8	851 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	DHX35	Q9H5Z1	703 aa	Known RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	HPR	P00739	348 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SRPRA	P08240	638 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	FGFR2	P21802	821 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CREM	Q03060	361 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CDK10	Q15131	360 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	FBXO31	Q5XUX0	539 aa	Predicted RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	FAM120B	Q96EK7	910 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	EXOC2	Q96KP1	924 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GATA5	Q9BWX5	397 aa	Predicted RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	THG1L	Q9NWX6	298 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	UCKL1	Q9NWZ5	548 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GLTP	Q9NZD2	209 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	TMEM181	Q9P2C4	612 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	AP4E1	Q9UPM8	1137 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	EPHB6	O15197	1021 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	DHX15	O43143	795 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SNAP29	O95721	258 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF143	P52747	638 aa	Predicted RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CDH15	P55291	814 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SCML4	Q8N228	414 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PARP8	Q8N3A8	854 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CANT1	Q8WVQ1	401 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PYURF	Q96I23	114 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	NARS2	Q96I59	477 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GINS2	Q9Y248	185 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PCDHGB7	Q9Y5F8	929 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SBK2	P0C263	348 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	RAP2A	P10114	183 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	MTHFR	P42898	656 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	MAPK8	P45983	427 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SNAPC2	Q13487	334 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PCDHGB1	Q9Y5G3	927 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288		A0A1W2PP18	115 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CHRNA1	P02708	482 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	ANXA8	P13928	327 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	TCF3	P15923	654 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CTSK	P43235	329 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	JAM2	P57087	298 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CDC42	P60953	191 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	MAPKAPK3	Q16644	382 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GPAT2	Q6NUI2	795 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	ITCH	Q96J02	903 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	TEFM	Q96QE5	360 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	EIF2B3	Q9NR50	452 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	METTL18	O95568	372 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC3A1	Q07837	685 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	NME3	Q13232	169 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GJB7	Q6PEY0	223 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GMCL1P1	Q8NEA9	526 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	MTMR4	Q9NYA4	1195 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PREX1	Q8TCU6	1659 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288		A0A0A0MRY4	1105 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SGTA	O43765	313 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	LIPE	Q05469	1076 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CDKL4	Q5MAI5	379 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	ADAMTSL2	Q86TH1	951 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC47A2	Q86VL8	602 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	NAT8L	Q8N9F0	302 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	FNDC5	Q8NAU1	212 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	LPCAT1	Q8NF37	534 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	BIRC7	Q96CA5	298 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	RCN3	Q96D15	328 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SPATA13	Q96N96	652 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	KCTD15	Q96SI1	283 aa	Predicted RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PRKCH	P24723	683 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	RGS4	P49798	205 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	BIK	Q13323	160 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	ZSWIM7	Q19AV6	140 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	XKR3	Q5GH77	459 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	CASP12	Q6UXS9	341 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	NGRN	Q9NPE2	291 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	ST3GAL5	Q9UNP4	418 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	KLK4	Q9Y5K2	254 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC28A1	O00337	649 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	LYPLA2	O95372	231 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PAH	P00439	452 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	ITGAL	P20701	1170 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GPD1	P21695	349 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	S100A3	P33764	101 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PIK3R6	Q5UE93	754 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	SLITRK4	Q8IW52	837 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GPALPP1	Q8IXQ4	340 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	FAM84B	Q96KN1	310 aa	Predicted RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	BRD9	Q9H8M2	597 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	WDR6	Q9NNW5	1121 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	XPNPEP3	Q9NQH7	507 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	XPR1	Q9UBH6	696 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	GABBR1	Q9UBS5	961 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	N6AMT1	Q9Y5N5	214 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PLOD3	O60568	738 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	TDP2	O95551	362 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms