RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CNTD1Q8N815 330 aa17.59■□□□□ 0.41
NME3-205ENST00000563854 MLPHQ9BV36 600 aaPredicted RBP17.59■□□□□ 0.41
NME3-205ENST00000563854 TRIM5Q9C035 493 aa17.59■□□□□ 0.41
NME3-205ENST00000563854 PISDQ9UG56 409 aa17.59■□□□□ 0.41
NME3-205ENST00000563854 TMX2-CTNND1H3BSU7 103 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 NUDT21O43809 227 aaKnown RBP17.58■□□□□ 0.4
NME3-205ENST00000563854 ITGA2BP08514 1039 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 ZFXP17010 805 aaPredicted RBP17.58■□□□□ 0.4
NME3-205ENST00000563854 COMTP21964 271 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 UGT1A5P35504 534 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 PPM1FP49593 454 aaPredicted RBP17.58■□□□□ 0.4
NME3-205ENST00000563854 TMPRSS3P57727 454 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 OR1D5P58170 312 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 RPL26P61254 145 aaKnown RBP17.58■□□□□ 0.4
NME3-205ENST00000563854 PDK1Q15118 436 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 KIF26BQ2KJY2 2108 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 ARHGAP40Q5TG30 622 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 KAZNQ674X7 775 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 IGF2-ASQ6U949 168 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 GALNT13Q8IUC8 556 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 EXD1Q8NHP7 514 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 CCHCR1Q8TD31 782 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 ADGRE3Q9BY15 652 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 ZMYND15Q9H091 742 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 RDH14Q9HBH5 336 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 DDX56Q9NY93 547 aaKnown RBP17.58■□□□□ 0.4
NME3-205ENST00000563854 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.58■□□□□ 0.4
NME3-205ENST00000563854 PKD2L2Q9NZM6 624 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 RPL26L1Q9UNX3 145 aaKnown RBP17.58■□□□□ 0.4
NME3-205ENST00000563854 PRKAB1Q9Y478 270 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 LOXL2Q9Y4K0 774 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 ST14Q9Y5Y6 855 aa17.58■□□□□ 0.4
NME3-205ENST00000563854 CDRT15L2A8MXV6 281 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 ZNF487B1APH4 448 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 ATP1A1P05023 1023 aaKnown RBP17.57■□□□□ 0.4
NME3-205ENST00000563854 PYGLP06737 847 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 PIRTP0C851 137 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 PNLIPP16233 465 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 CCKBRP32239 447 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 SLC1A1P43005 524 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 EIF3IQ13347 325 aaKnown RBP17.57■□□□□ 0.4
NME3-205ENST00000563854 LRRC38Q5VT99 294 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 ALS2CLQ60I27 953 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 MFSD7Q6UXD7 560 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 LYSMD3Q7Z3D4 306 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 NRSN1Q8IZ57 195 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 CCDC97Q96F63 343 aaPredicted RBP17.57■□□□□ 0.4
NME3-205ENST00000563854 DPH1Q9BZG8 443 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 BRD8Q9H0E9 1235 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 GOLPH3Q9H4A6 298 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 ZNHIT2Q9UHR6 403 aa17.57■□□□□ 0.4
NME3-205ENST00000563854 TRBV23OR9-2A0A075B6M9 112 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 ANKRD66B4E2M5 251 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 ITIH1P19827 911 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 MAGEA1P43355 309 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 SPINT3P49223 89 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 UCNP55089 124 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 B4GALNT1Q00973 533 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 TBX2Q13207 712 aaPredicted RBP17.56■□□□□ 0.4
NME3-205ENST00000563854 PEX6Q13608 980 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 PYCR3Q53H96 274 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 USP53Q70EK8 1073 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 TMPRSS9Q7Z410 1059 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 CLEC14AQ86T13 490 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 NT5DC3Q86UY8 548 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 VSIG1Q86XK7 387 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 NAGSQ8N159 534 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 OLFM3Q96PB7 478 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 LYSMD1Q96S90 227 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 SEMA6CQ9H3T2 930 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 FAM83DQ9H4H8 585 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 SAE1Q9UBE0 346 aaPredicted RBP17.56■□□□□ 0.4
NME3-205ENST00000563854 INTUQ9ULD6 942 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 SHOC2Q9UQ13 582 aa17.56■□□□□ 0.4
NME3-205ENST00000563854 OAS3Q9Y6K5 1087 aaKnown RBP17.56■□□□□ 0.4
NME3-205ENST00000563854 FADS2P1A8MWK0 482 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 B4GAT1O43505 415 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 PRB1P04280 392 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 SLC5A2P31639 672 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 MLLT3P42568 568 aaPredicted RBP17.55■□□□□ 0.4
NME3-205ENST00000563854 MAPK10P53779 464 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 CHST15Q7LFX5 561 aaPredicted RBP17.55■□□□□ 0.4
NME3-205ENST00000563854 PIM3Q86V86 326 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 SPATA22Q8NHS9 363 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 HAUS1Q96CS2 278 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 IMP4Q96G21 291 aaKnown RBP17.55■□□□□ 0.4
NME3-205ENST00000563854 COX14Q96I36 57 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 WDR24Q96S15 920 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 NUDT22Q9BRQ3 303 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 ARFGAP3Q9NP61 516 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 TFR2Q9UP52 801 aa17.55■□□□□ 0.4
NME3-205ENST00000563854 PTPRQQ9UMZ3 2332 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 TEX51A0A1B0GUA7 166 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 F5H423 210 aaPredicted RBP17.54■□□□□ 0.4
NME3-205ENST00000563854 ZW10O43264 779 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 PMPCBO75439 489 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 CPNE6O95741 557 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 PECAM1P16284 738 aaPredicted RBP17.54■□□□□ 0.4
NME3-205ENST00000563854 CDKN2BP42772 138 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 ZFP36L1Q07352 338 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms