RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SNX1Q13596 522 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 BYSLQ13895 437 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 HNRNPDQ14103 355 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 LRRC32Q14392 662 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 KCTD19Q17RG1 926 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 WHAMMP3Q1A5X7 153 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 HNRNPA1L2Q32P51 320 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 ATXN7L2Q5T6C5 722 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 C9orf64Q5T6V5 341 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 TIGD7Q6NT04 549 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 ZCCHC8Q6NZY4 707 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 DARS2Q6PI48 645 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 SERPINA13PQ6UXR4 307 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 ZNF354CQ86Y25 554 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 KLHDC8BQ8IXV7 354 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 ZNF567Q8N184 647 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 PCDH20Q8N6Y1 951 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 FAM71DQ8N9W8 422 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 TEX19Q8NA77 164 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 ATP11CQ8NB49 1132 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 GLIS1Q8NBF1 620 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 TXNDC5Q8NBS9 432 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 CHST14Q8NCH0 376 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 CCNYQ8ND76 341 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 LRRN4CLQ8ND94 238 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 BVESQ8NE79 360 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 SPATA4Q8NEY3 305 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 FLCNQ8NFG4 579 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 OR2A12Q8NGT7 310 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 KIF18AQ8NI77 898 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 ARRDC2Q8TBH0 407 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 UCMAQ8WVF2 138 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 HTR3CQ8WXA8 447 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 CASKIN2Q8WXE0 1202 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 EXOC4Q96A65 974 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 MAGOHBQ96A72 148 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 ISG20Q96AZ6 181 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 TADA1Q96BN2 335 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 RCC1LQ96I51 464 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 MAGEB10Q96LZ2 347 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 CCDC140Q96MF4 163 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 PSKH2Q96QS6 385 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 NELL2Q99435 816 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 NAP1L3Q99457 506 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 GABRG3Q99928 467 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 MGME1Q9BQP7 344 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 GORASP1Q9BQQ3 440 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 TMEM121Q9BTD3 319 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 TM6SF2Q9BZW4 377 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 PRDM14Q9GZV8 571 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 MKRN2Q9H000 416 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 DDX47Q9H0S4 455 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 TRIT1Q9H3H1 467 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 EPHX3Q9H6B9 360 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 L2HGDHQ9H9P8 463 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 PPCSQ9HAB8 311 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 GLOD4Q9HC38 313 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 NT5MQ9NPB1 228 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 RBM22Q9NW64 420 aaKnown RBP eCLIP5.25□□□□□ -1.578e-10■■■■■ 33.4
HERPUD1-207ENST00000563781 GPATCH2Q9NW75 528 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 MMP17Q9ULZ9 603 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 HPCAL4Q9UM19 191 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 DRG1Q9Y295 367 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 MRPS17Q9Y2R5 130 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 NEU2Q9Y3R4 380 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 DOCK4Q8N1I0 1966 aa5.25□□□□□ -1.57
HERPUD1-207ENST00000563781 WDFY4Q6ZS81 3184 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 NYNRINQ9P2P1 1898 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 CHD5Q8TDI0 1954 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 TARSL2A2RTX5 802 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 CFAP69A5D8W1 941 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 SHOXO15266 292 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 INSIG1O15503 277 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 KCNN4O15554 427 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 MTSS1O43312 755 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 OPHN1O60890 802 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 GCATO75600 419 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 METTL18O95568 372 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 GSRP00390 522 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 ESR1P03372 595 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 CTSLP07711 333 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 MMP2P08253 660 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 ZSCAN5DPP0CG00 497 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 CCNB1P14635 433 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 HOXB2P14652 356 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 ETS1P14921 441 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 AOC1P19801 751 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 FUT4P22083 530 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 GKP32189 559 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 HSPA9P38646 679 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 PAFAH1B1P43034 410 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 MMP13P45452 471 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 ID4P47928 161 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 CSNK1DP48730 415 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 RENBPP51606 427 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 CLCN5P51795 746 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 CCNHP51946 323 aaPredicted RBP5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 COPAP53621 1224 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 RHOAP61586 193 aa5.24□□□□□ -1.57
HERPUD1-207ENST00000563781 ST8SIA6P61647 398 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms