RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CCDC162PA2VCL2 907 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 C7orf72A4D263 438 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 CCDC154A6NI56 674 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 PTGESO14684 152 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 NRP2O60462 931 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 DLX3O60479 287 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 CTPS1P17812 591 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 WEE1P30291 646 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 CCL23P55773 120 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 PFKPQ01813 784 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 NIPAL4Q0D2K0 466 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 ELAVL2Q12926 359 aaKnown RBP10.43□□□□□ -0.74
RNF40-204ENST00000563683 RBM20Q5T481 1227 aaKnown RBP10.43□□□□□ -0.74
RNF40-204ENST00000563683 ELMSAN1Q6PJG2 1045 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 UROC1Q96N76 676 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 SUCOQ9UBS9 1254 aaKnown RBP10.43□□□□□ -0.74
RNF40-204ENST00000563683 ACOT8O14734 319 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 AZIN1O14977 448 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 ZBTB11O95625 1053 aaPredicted RBP10.43□□□□□ -0.74
RNF40-204ENST00000563683 ZNF24P17028 368 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 ATP6V1B2P21281 511 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 OR1D2P34982 312 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 GPR15P49685 360 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 PURAQ00577 322 aaKnown RBP10.43□□□□□ -0.74
RNF40-204ENST00000563683 GTF2H3Q13889 308 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 TRIM25Q14258 630 aaKnown RBP10.43□□□□□ -0.74
RNF40-204ENST00000563683 SQLEQ14534 574 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 TSTD2Q5T7W7 516 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 TMEM53Q6P2H8 277 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 LINGO4Q6UY18 593 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 TPGS1Q6ZTW0 290 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 STON2Q8WXE9 905 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 FCRL5Q96RD9 977 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 ACTR8Q9H981 624 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 MTMR10Q9NXD2 777 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 EBF1Q9UH73 591 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 ATXN8OSP0DMR3 200 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 ITGALP20701 1170 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 RHDQ02161 417 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 CHRNB3Q05901 458 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 GALNT2Q10471 571 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 MOGQ16653 247 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 SLC24A5Q71RS6 500 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 CENPSQ8N2Z9 138 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 FIBCD1Q8N539 461 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 SCAIQ8N9R8 606 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 FAM47BQ8NA70 645 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 CIB1Q99828 191 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 PCDHAC1Q9H158 963 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 GTF2IRD1Q9UHL9 959 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 DOLKQ9UPQ8 538 aa10.43□□□□□ -0.74
RNF40-204ENST00000563683 FFAR3O14843 346 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 GPR42O15529 346 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 SH3BGRLO75368 114 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 RHOQP17081 205 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 MAP4P27816 1152 aaKnown RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 TRAP1Q12931 704 aaKnown RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 BFSP2Q13515 415 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 RGS21Q2M5E4 152 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 VPS26BQ4G0F5 336 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 VARS2Q5ST30 1063 aaKnown RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 OR56A4Q8NGH8 313 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 FIG4Q92562 907 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 MTFMTQ96DP5 389 aaKnown RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 TBCDQ9BTW9 1192 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 CXorf21Q9HAI6 301 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 DNMT3LQ9UJW3 386 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 EIF3LQ9Y262 564 aaKnown RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 A0A1B0GTW7 788 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 SOBPA7XYQ1 873 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 FAM155AB1AL88 458 aaPredicted RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 DCLK1O15075 740 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 TIPRLO75663 272 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 SIX3O95343 332 aaPredicted RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 FUT4P22083 530 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 ARRB2P32121 409 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 PTPRCAPQ14761 206 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 HECTD3Q5T447 861 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 AGMOQ6ZNB7 445 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 ZNF534Q76KX8 674 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 MILR1Q7Z6M3 343 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 C17orf50Q8WW18 174 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 LRTOMTQ8WZ04 291 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 LPGAT1Q92604 370 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 NSMCE2Q96MF7 247 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 NOL11Q9H8H0 719 aaKnown RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 TRIM17Q9Y577 477 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 KCTD3Q9Y597 815 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 A0A0J9YYE9 177 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 UBXN8O00124 270 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 HTRA2O43464 458 aaPredicted RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 RPL17P18621 184 aaKnown RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 SLC7A1P30825 629 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 TUFMP49411 452 aaKnown RBP10.42□□□□□ -0.74
RNF40-204ENST00000563683 TTLL9Q3SXZ7 439 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 MTX3Q5HYI7 312 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 C14orf80Q86SX3 495 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 PACRGLQ8N7B6 248 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 OR13C4Q8NGS5 318 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 MAPK15Q8TD08 544 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms