RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ATAT1Q5SQI0 421 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 RARS2Q5T160 578 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 TXNDC8Q6A555 127 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 TXNRD3NBQ6F5E7 133 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 RWDD4Q6NW29 188 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 AADACL2Q6P093 401 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 TMEM184AQ6ZMB5 413 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 RHOUQ7L0Q8 258 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 GSTA5Q7RTV2 222 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 GRASPQ7Z6J2 395 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 ADGRD2Q7Z7M1 963 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 CCDC117Q8IWD4 279 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 CCDC105Q8IYK2 499 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 CCDC185Q8N715 623 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 ARL14EPQ8N8R7 260 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 SPATA4Q8NEY3 305 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 VN1R2Q8NFZ6 395 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 ATL2Q8NHH9 583 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 FAM71BQ8TC56 605 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 SMG7Q92540 1137 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 RAPGEF5Q92565 580 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 P3H4Q92791 437 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 MAGOHBQ96A72 148 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 SLC39A13Q96H72 371 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 RIPOR3Q96MK2 946 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 CYP2S1Q96SQ9 504 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 ZNF670Q9BS34 389 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 AP1M1Q9BXS5 423 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 EPC1Q9H2F5 836 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 PRO3102Q9H379 93 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 PRDM12Q9H4Q4 367 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 TASP1Q9H6P5 420 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 ZNF334Q9HCZ1 680 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 WDR6Q9NNW5 1121 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 GKN1Q9NS71 199 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 GPATCH2LQ9NWQ4 482 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 ZNF148Q9UQR1 794 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 DRG1Q9Y295 367 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 RAD54BQ9Y620 910 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 COL4A4P53420 1690 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 MYO9BQ13459 2157 aa4.71□□□□□ -1.65
CDR2-203ENST00000563573 DOCK4Q8N1I0 1966 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 NUP210Q8TEM1 1887 aaPredicted RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 C5orf42Q9H799 3197 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 EPOPA6NHQ4 379 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 C3orf70A6NLC5 250 aaPredicted RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 HACD1B0YJ81 288 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 E9PAM4 449 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 F5H5T6 163 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 H7C0C1 242 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 APOC4-APOC2K7ER74 178 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 NDC80O14777 642 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 MCF2LO15068 1137 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 NCAM2O15394 837 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 MSI1O43347 362 aaKnown RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 PHF2O75151 1096 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ABHD16AO95870 558 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 OAS1P00973 400 aaKnown RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 APOC2P02655 101 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CD48P09326 243 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 IRF1P10914 325 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 KRT10P13645 584 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 GOT1P17174 413 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ERCC2P18074 760 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 KRT4P19013 534 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 POU3F3P20264 500 aaPredicted RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 TGM2P21980 687 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 IL4RP24394 825 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 MCM3P25205 808 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 EPHB2P29323 1055 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CORO1AP31146 461 aaKnown RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 STIP1P31948 543 aaKnown RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 SERPINB6P35237 376 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ACTN2P35609 894 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CHKAP35790 457 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 COILP38432 576 aaPredicted RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 MTHFRP42898 656 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ATP5OP48047 213 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ARSEP51690 589 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 TERF1P54274 439 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 DYNLT1P63172 113 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 SLC7A9P82251 487 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 C2orf54Q08AI8 447 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 HYAL1Q12794 435 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 SNX1Q13596 522 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 BYSLQ13895 437 aaKnown RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 KCNC3Q14003 757 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 DHX34Q14147 1143 aaKnown RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 LLGL1Q15334 1064 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 TAZQ16635 292 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CA9Q16790 459 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 RAB6CQ53S08 254 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 TCEAL5Q5H9L2 206 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 DCAF12L1Q5VU92 463 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 C1QL3Q5VWW1 255 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ANKRD54Q6NXT1 300 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 C8orf74Q6P047 294 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 DARS2Q6PI48 645 aaKnown RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 C1orf228Q6PIY5 440 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CCDC137Q6PK04 289 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms