RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 NAA35Q5VZE5 725 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 FRG2Q64ET8 278 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 OR7E24Q6IFN5 339 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 DGLUCYQ7Z3D6 616 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 SLC46A3Q7Z3Q1 461 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 KRTAP7-1Q8IUC3 87 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 CTAGE4Q8IX94 777 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 CNBD1Q8NA66 436 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 OR10V1Q8NGI7 309 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 OR52I2Q8NH67 350 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 SLC38A5Q8WUX1 472 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 GCC1Q96CN9 775 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 ST6GAL2Q96JF0 529 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 UBXN10Q96LJ8 280 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 ZNF354BQ96LW1 612 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 QRFPRQ96P65 431 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 BARHL1Q9BZE3 327 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 SLC6A13Q9NSD5 602 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 FAM118AQ9NWS6 357 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 GGA3Q9NZ52 723 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 MPP6Q9NZW5 540 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 AAR2Q9Y312 384 aaKnown RBP3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 UTYO14607 1347 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 SMCHD1A6NHR9 2005 aa3.15□□□□□ -1.9
HMGB1P33-201ENST00000563485 A0A1W2PQM1 296 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 USP17L23D6RBM5 183 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TSPAN4O14817 238 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 SPINT2O43291 252 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 IGHV4-39P01824 125 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TUBBP07437 444 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 PATE4P0C8F1 98 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 DCTP40126 519 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TERF1P54274 439 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 EEF1A1P68104 462 aaKnown RBP3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TUBB4BP68371 445 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 RPL24P83731 157 aaKnown RBP3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TLE2Q04725 743 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 USP41Q3LFD5 358 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 KRT71Q3SY84 523 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 ZNF876PQ49A33 203 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TMEM35AQ53FP2 167 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 C6orf141Q5SZD1 244 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 CCNYL2Q5T2Q4 361 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 EEF1A1P5Q5VTE0 462 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 SIGIRRQ6IA17 410 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 SLC35E4Q6ICL7 350 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TTI2Q6NXR4 508 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 CEACAM20Q6UY09 585 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 CYP26C1Q6V0L0 522 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 NRROSQ86YC3 692 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 CCDC13Q8IYE1 715 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 ZNF485Q8NCK3 441 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 CADM4Q8NFZ8 388 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 LGALS12Q96DT0 336 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 LINGO1Q96FE5 620 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TMEM47Q9BQJ4 181 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 NEURL2Q9BR09 285 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 UPF2Q9HAU5 1272 aaKnown RBP3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 ACSS1Q9NUB1 689 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 PPP1R14DQ9NXH3 145 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 KCND2Q9NZV8 630 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 SARDHQ9UL12 918 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 ACSL5Q9ULC5 683 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 TBX20Q9UMR3 447 aa3.15□□□□□ -1.91
HMGB1P33-201ENST00000563485 IGLV5-45A0A087WSX0 123 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 ERI2A8K979 691 aaKnown RBP3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 IFRD1O00458 451 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 FAM106CPP0CH98 169 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 HSD3B1P14060 373 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 ABCD1P33897 745 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 FASLGP48023 281 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 AMPHP49418 695 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 MMP14P50281 582 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 HSD17B4P51659 736 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 CLDN20P56880 219 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 PMP22Q01453 160 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 RUNX1T1Q06455 604 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 PPIGQ13427 754 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 TRPC3Q13507 836 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 DRAP1Q14919 205 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 PRICKLE4Q2TBC4 344 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 DPPA4Q7L190 304 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 GPR180Q86V85 440 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 SRBD1Q8N5C6 995 aaKnown RBP3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 TAAR8Q969N4 342 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 HVCN1Q96D96 273 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 PPP1R13BQ96KQ4 1090 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 C17orf77Q96MU5 243 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 ACOX2Q99424 681 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 EIF2AK1Q9BQI3 630 aaKnown RBP3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 FSD1Q9BTV5 496 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 SLC25A18Q9H1K4 315 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 TFB2MQ9H5Q4 396 aaKnown RBP3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 BRF2Q9HAW0 419 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 VEZTQ9HBM0 779 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 MAP3K20Q9NYL2 800 aaKnown RBP3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 KLHL20Q9Y2M5 609 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 MMP24Q9Y5R2 645 aa3.14□□□□□ -1.91
HMGB1P33-201ENST00000563485 DGKBQ9Y6T7 804 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms