RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 EIF2DP41214 584 aaKnown RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 SOX9P48436 509 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 TTPAP49638 278 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 BST1Q10588 318 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 ILF2Q12905 390 aaKnown RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 CSHL1Q14406 222 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 ZCCHC23Q6ZST2 131 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 TRIM42Q8IWZ5 723 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 CACNA2D3Q8IZS8 1091 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 FSTL5Q8N475 847 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 UBXN10Q96LJ8 280 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 OSBPL1AQ9BXW6 950 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 ZNF395Q9H8N7 513 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 STARD13Q9Y3M8 1113 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 H3BQ06 376 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-208ENST00000563220 C1SP09871 688 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 UGT1A6P19224 532 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 UGT1A1P22309 533 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 UGT1A4P22310 534 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 UGT1A3P35503 534 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 UGT1A5P35504 534 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 SUOXP51687 545 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 CHRNA6Q15825 494 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 SETMARQ53H47 684 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-208ENST00000563220 LRRC8EQ6NSJ5 796 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 MTSS1LQ765P7 747 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 SPATA21Q7Z572 469 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 TBC1D1Q86TI0 1168 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-208ENST00000563220 TTC7BQ86TV6 843 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 THOC1Q96FV9 657 aaKnown RBP17.96■□□□□ 0.47
COMMD4-208ENST00000563220 TSNARE1Q96NA8 513 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 NECTIN4Q96NY8 510 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 ACOX2Q99424 681 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 TSSK1BQ9BXA7 367 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 C20orf27Q9GZN8 174 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 ASB8Q9H765 288 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 PCDH12Q9NPG4 1184 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 DKK3Q9UBP4 350 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 APPL1Q9UKG1 709 aa17.96■□□□□ 0.47
COMMD4-208ENST00000563220 GLYATL1P3A0A0U1RQE8 302 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 EDDM13A0A1B0GTR0 161 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 C16orf96A6NNT2 1141 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 UPK3BL1B0FP48 263 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-208ENST00000563220 TARM1B6A8C7 271 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 UPK3BL2E5RIL1 263 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 ANHXE9PGG2 379 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 TK2O00142 265 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 CCDC166P0CW27 439 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 SPAM1P38567 509 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 GRIA2P42262 883 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 IL12RB1P42701 662 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 METAP1P53582 386 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 NFATC2Q13469 925 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 HTR4Q13639 388 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 DBN1Q16643 649 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 AARS2Q5JTZ9 985 aaKnown RBP17.95■□□□□ 0.46
COMMD4-208ENST00000563220 RNF187Q5TA31 235 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-208ENST00000563220 SNX20Q7Z614 316 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 CCDC197Q8NCU1 140 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 HCAR2Q8TDS4 363 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 UCMAQ8WVF2 138 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 PBXIP1Q96AQ6 731 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 FAM136AQ96C01 138 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 GRAMD1AQ96CP6 724 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 CCDC97Q96F63 343 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-208ENST00000563220 SCYL1Q96KG9 808 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 FAM129BQ96TA1 746 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 THAP10Q9P2Z0 257 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-208ENST00000563220 TMEM265A0A087WTH1 108 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 OVGP1Q12889 678 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 CTSL3PQ5NE16 218 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 ATG16L1Q676U5 607 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 SERPINA13PQ6UXR4 307 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 SERPINA9Q86WD7 417 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 RAB3IL1Q8TBN0 382 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 FAM161BQ96MY7 647 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 GALPQ9UBC7 116 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 CD207Q9UJ71 328 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 PPM1HQ9ULR3 514 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 VPS9D1Q9Y2B5 631 aa17.95■□□□□ 0.46
COMMD4-208ENST00000563220 TRBV5-4A0A0C4DH59 114 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 PFDN6O15212 129 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 SNNO75324 88 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-208ENST00000563220 RHOBTB1O94844 696 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 LTA4HP09960 611 aaKnown RBP17.94■□□□□ 0.46
COMMD4-208ENST00000563220 PKMP14618 531 aaKnown RBP17.94■□□□□ 0.46
COMMD4-208ENST00000563220 VIPR1P32241 457 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 PTGER3P43115 390 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 GALK1P51570 392 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 PTPN5P54829 565 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 STX3Q13277 289 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 TSNAXIP1Q2TAA8 658 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 EGFLAMQ63HQ2 1017 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 CERS6Q6ZMG9 384 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 PARS2Q7L3T8 475 aaKnown RBP17.94■□□□□ 0.46
COMMD4-208ENST00000563220 OR6Y1Q8NGX8 325 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 ZNF398Q8TD17 642 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 P2RY12Q9H244 342 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 CCDC68Q9H2F9 335 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms