RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 VPS26BQ4G0F5 336 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 ALFQ53S48 1182 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 ANKS6Q68DC2 871 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 TXNDC11Q6PKC3 985 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 LPCAT2Q7L5N7 544 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 ZNF354CQ86Y25 554 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 DDIASQ8IXT1 998 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 PGBD5Q8N414 524 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 PAPD5Q8NDF8 572 aaKnown RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 HASPINQ8TF76 798 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 TUBGCP3Q96CW5 907 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 DNAJC1Q96KC8 554 aaKnown RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 SLC39A3Q9BRY0 314 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 C1QTNF3Q9BXJ4 246 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 YTHDF1Q9BYJ9 559 aaKnown RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 SLC52A3Q9NQ40 469 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 CMTM6Q9NX76 183 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 IL37Q9NZH6 218 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 DOCK4Q8N1I0 1966 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 A0A1W2PP18 115 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 CCDC162PA2VCL2 907 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 GLTPD2A6NH11 291 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 FXYD1O00168 92 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 STX16O14662 325 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 MGEA5O60502 916 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 CLASP2O75122 1294 aaKnown RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 MT-CO1P00395 513 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 HGFP14210 728 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 PCSK6P29122 969 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 CD52P31358 61 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 MAGEA11P43364 429 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 STC1P52823 247 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 NUP107P57740 925 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 EEFSECP57772 596 aaKnown RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 GRB7Q14451 532 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 SLC36A3Q495N2 470 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 SLC39A12Q504Y0 691 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 ALG1LQ6GMV1 187 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 DHRS4L2Q6PKH6 230 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 SPPL2CQ8IUH8 684 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 ADGRG5Q8IZF4 528 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 RYBPQ8N488 228 aaPredicted RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 FBXO39Q8N4B4 442 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 SNX31Q8N9S9 440 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 FAM47BQ8NA70 645 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 DIS3LQ8TF46 1054 aaKnown RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 SEMA3CQ99985 751 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 ADI1Q9BV57 179 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 TUBB1Q9H4B7 451 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 RETREG1Q9H6L5 497 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 TAS2R13Q9NYV9 303 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 POLG2Q9UHN1 485 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 KCTD3Q9Y597 815 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 GPR45Q9Y5Y3 372 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 ANKRD36A6QL64 1941 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 SCN10AQ9Y5Y9 1956 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 A0A1B0GTW7 788 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 FAM92AA1XBS5 289 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 SAC3D1A6NKF1 404 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 PLOD2O00469 737 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 DLGAP1O14490 977 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 PRAMEF11O60813 436 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 OAZ2O95190 189 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 RASAL1O95294 804 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 SIX3O95343 332 aaPredicted RBP13.03□□□□□ -0.32
USB1-207ENST00000563149 CHEK2O96017 543 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 RPS17P08708 135 aaKnown RBP13.03□□□□□ -0.32
USB1-207ENST00000563149 CD9P21926 228 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 CCT8P50990 548 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 KCNK10P57789 538 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 PLOD1Q02809 727 aaPredicted RBP13.03□□□□□ -0.32
USB1-207ENST00000563149 RAD51Q06609 339 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 ZBED5Q49AG3 693 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 PITRM1Q5JRX3 1037 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 GNASQ5JWF2 1037 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 FBXL22Q6P050 247 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 TTC33Q6PID6 262 aaPredicted RBP13.03□□□□□ -0.32
USB1-207ENST00000563149 PRR23BQ6ZRT6 265 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 GPR141Q7Z602 305 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 CROCCP3Q8IVE0 287 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 TBC1D21Q8IYX1 336 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 BBS5Q8N3I7 341 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 CBR4Q8N4T8 237 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 NKAPQ8N5F7 415 aaKnown RBP13.03□□□□□ -0.32
USB1-207ENST00000563149 BLOC1S5Q8TDH9 187 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 GAB3Q8WWW8 586 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 SOCS4Q8WXH5 440 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 SEPT8Q92599 483 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 EXT2Q93063 718 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 TMEM125Q96AQ2 219 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 LRCH3Q96II8 777 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 AIG1Q9NVV5 245 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 NLE1Q9NVX2 485 aaPredicted RBP13.03□□□□□ -0.32
USB1-207ENST00000563149 RNF112Q9ULX5 631 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 AURKCQ9UQB9 309 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms