RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TLE3Q04726 772 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 CCDC173Q0VFZ6 552 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 TBC1D25Q3MII6 688 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 FAXCQ5TGI0 409 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 RAET1GQ6H3X3 334 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 SLC13A5Q86YT5 568 aaPredicted RBP16.5■□□□□ 0.23
CDT1-202ENST00000562747 PELI3Q8N2H9 469 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 OR4C6Q8NH72 309 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 FGF11Q92914 225 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 AP2M1Q96CW1 435 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 MRGPRX2Q96LB1 330 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 SPATA13Q96N96 652 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 DUSP23Q9BVJ7 150 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 TEX101Q9BY14 249 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 SLC13A1Q9BZW2 595 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 ABCG8Q9H221 673 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 KCNF1Q9H3M0 494 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 ZFYVE1Q9HBF4 777 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 PHPT1Q9NRX4 125 aaPredicted RBP16.5■□□□□ 0.23
CDT1-202ENST00000562747 NLGN3Q9NZ94 848 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 KLQ9UEF7 1012 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 PNMA8BQ9ULN7 279 aaPredicted RBP16.5■□□□□ 0.23
CDT1-202ENST00000562747 AAR2Q9Y312 384 aaKnown RBP16.5■□□□□ 0.23
CDT1-202ENST00000562747 TDRD6O60522 2096 aaKnown RBP16.49■□□□□ 0.23
CDT1-202ENST00000562747 ZNF462Q96JM2 2506 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 C5orf60A6NFR6 353 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 ZSCAN12O43309 604 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 FLNBO75369 2602 aaKnown RBP16.49■□□□□ 0.23
CDT1-202ENST00000562747 RASGRP1O95267 797 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 HLA-DPA1P20036 260 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 GPR1P46091 355 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 SPINT3P49223 89 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 SRP54P61011 504 aaKnown RBP16.49■□□□□ 0.23
CDT1-202ENST00000562747 CDK3Q00526 305 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 PRPSAP1Q14558 356 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 ALG11Q2TAA5 492 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 TENM4Q6N022 2769 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 RFLNAQ6ZTI6 216 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 LYSMD3Q7Z3D4 306 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 HEATR4Q86WZ0 1026 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 SPACA3Q8IXA5 215 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 RBFAQ8N0V3 343 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 CACTIN-AS1Q8N1I8 211 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 IPMKQ8NFU5 416 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 OR56A4Q8NGH8 313 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 CCDC110Q8TBZ0 833 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 FSD1LQ9BXM9 530 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 TLR10Q9BXR5 811 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 RAD18Q9NS91 495 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 CD84Q9UIB8 345 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 R3HDM2Q9Y2K5 976 aaKnown RBP16.49■□□□□ 0.23
CDT1-202ENST00000562747 ZNF711Q9Y462 761 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 DGKBQ9Y6T7 804 aa16.49■□□□□ 0.23
CDT1-202ENST00000562747 MGAQ8IWI9 3026 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 GOLGA6CA6NDK9 693 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 GOLGA6BA6NDN3 693 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 TMEM202A6NGA9 273 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 F5H423 210 aaPredicted RBP16.48■□□□□ 0.23
CDT1-202ENST00000562747 TPP1O14773 563 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 FFAR2O15552 330 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 MT-CO3P00414 261 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 TNFP01375 233 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 GOLGA6DP0CG33 693 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 GIMD1P0DJR0 217 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 PLA2G2AP14555 144 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 PSMB4P28070 264 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 SLC1A5Q15758 541 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 PRRT3Q5FWE3 981 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 SIRPB2Q5JXA9 342 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 ADAMTSL4Q6UY14 1074 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 TMC3Q7Z5M5 1100 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 HID1Q8IV36 788 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 REXO1L1PQ8IX06 675 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 SDR16C5Q8N3Y7 309 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 ZNF843Q8N446 348 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 FSTL5Q8N475 847 aaPredicted RBP16.48■□□□□ 0.23
CDT1-202ENST00000562747 LMX1AQ8TE12 382 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 SCAMP4Q969E2 229 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 TSACCQ96A04 125 aaPredicted RBP16.48■□□□□ 0.23
CDT1-202ENST00000562747 GORASP1Q9BQQ3 440 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 LRRC61Q9BV99 259 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 LGR4Q9BXB1 951 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 GPR63Q9BZJ6 419 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 CDH19Q9H159 772 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 TCEAL2Q9H3H9 227 aaPredicted RBP16.48■□□□□ 0.23
CDT1-202ENST00000562747 TRABDQ9H4I3 376 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 GOLGA6AQ9NYA3 693 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 SHOC2Q9UQ13 582 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 LRP4O75096 1905 aa16.48■□□□□ 0.23
CDT1-202ENST00000562747 LY6G6EA0A0G2JKS1 128 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 LIASO43766 372 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 GCATO75600 419 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 SOD1P00441 154 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 FGF1P05230 155 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 PIRTP0C851 137 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 MYF5P13349 255 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 CTSEP14091 401 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 STIP1P31948 543 aaKnown RBP16.47■□□□□ 0.23
CDT1-202ENST00000562747 ACTN2P35609 894 aa16.47■□□□□ 0.23
CDT1-202ENST00000562747 DCDC1P59894 354 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms