RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 PYGLP06737 847 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 ZFXP17010 805 aaPredicted RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 CCKBRP32239 447 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 SPINT3P49223 89 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 MAZP56270 477 aaKnown RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 OR1D5P58170 312 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 DYNLT1P63172 113 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 CXADRP78310 365 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 B4GALNT1Q00973 533 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 ZFP36L1Q07352 338 aaKnown RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 COL9A2Q14055 689 aaPredicted RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 PYCR3Q53H96 274 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 ODF2Q5BJF6 829 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 SARM1Q6SZW1 724 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 MFSD7Q6UXD7 560 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 MARK2Q7KZI7 788 aaKnown RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 RAB11FIP2Q7L804 512 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 TMPRSS9Q7Z410 1059 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 NT5DC3Q86UY8 548 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 RFX6Q8HWS3 928 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 RHOT1Q8IXI2 618 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 RAVER1Q8IY67 606 aaKnown RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 FBXO39Q8N4B4 442 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 TC2NQ8N9U0 490 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 EXD1Q8NHP7 514 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 KCNE4Q8WWG9 221 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 EID2BQ96D98 161 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 IMP4Q96G21 291 aaKnown RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 TMEM74Q96NL1 305 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 AGAP3Q96P47 875 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 OLFM3Q96PB7 478 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 MLPHQ9BV36 600 aaPredicted RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 ADGRE3Q9BY15 652 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 DPH1Q9BZG8 443 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 STRADBQ9C0K7 418 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 EPB41L5Q9HCM4 733 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 DDX56Q9NY93 547 aaKnown RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 SEPT10Q9P0V9 454 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 SAE1Q9UBE0 346 aaPredicted RBP10.23□□□□□ -0.77
CLK3-205ENST00000561673 SHROOM3Q8TF72 1996 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 RHPN2P1A8MT19 583 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 PPP1R12AO14974 1030 aaPredicted RBP10.22□□□□□ -0.77
CLK3-205ENST00000561673 SPOPO43791 374 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 ATP1A1P05023 1023 aaKnown RBP10.22□□□□□ -0.77
CLK3-205ENST00000561673 ITGA2BP08514 1039 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 HGFP14210 728 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 ALDH4A1P30038 563 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 UGT1A5P35504 534 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 ACTR1BP42025 376 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 CDKN2BP42772 138 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 MAGEA1P43355 309 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 NOP2P46087 812 aaKnown RBP10.22□□□□□ -0.77
CLK3-205ENST00000561673 ACTR1AP61163 376 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 EIF3IQ13347 325 aaKnown RBP10.22□□□□□ -0.77
CLK3-205ENST00000561673 GALNT3Q14435 633 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 LLGL1Q15334 1064 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 TAZQ16635 292 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 AMZ1Q400G9 498 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 HENMT1Q5T8I9 393 aaKnown RBP10.22□□□□□ -0.77
CLK3-205ENST00000561673 BROXQ5VW32 411 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 GPR155Q7Z3F1 870 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 ZNF438Q7Z4V0 828 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 CLEC14AQ86T13 490 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 NAGSQ8N159 534 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 CCHCR1Q8TD31 782 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 PATE1Q8WXA2 126 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 TADA1Q96BN2 335 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 OR2M4Q96R27 311 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 TRIB3Q96RU7 358 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 UBL7Q96S82 380 aaPredicted RBP10.22□□□□□ -0.77
CLK3-205ENST00000561673 TRIM5Q9C035 493 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 BRD8Q9H0E9 1235 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 CDH19Q9H159 772 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 SLC25A51Q9H1U9 297 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 SEMA6CQ9H3T2 930 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 FAM83DQ9H4H8 585 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 CPNE5Q9HCH3 593 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 ZNHIT2Q9UHR6 403 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 TFR2Q9UP52 801 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 PRKAB1Q9Y478 270 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 PCYT1BQ9Y5K3 369 aaPredicted RBP10.22□□□□□ -0.77
CLK3-205ENST00000561673 ALG6Q9Y672 507 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 OAS3Q9Y6K5 1087 aaKnown RBP10.22□□□□□ -0.77
CLK3-205ENST00000561673 ATRXP46100 2492 aa10.22□□□□□ -0.77
CLK3-205ENST00000561673 RGSL1A5PLK6 1076 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 FADS2P1A8MWK0 482 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 AGRPO00253 132 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 PPM1DO15297 605 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 DNAJC6O75061 913 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 LCA5LO95447 670 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 ASMTLO95671 621 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 MT-CYBP00156 380 aaPredicted RBP10.21□□□□□ -0.77
CLK3-205ENST00000561673 PIRTP0C851 137 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 CD1CP29017 333 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 SLC5A2P31639 672 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 GPR3P46089 330 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 NR2C2P49116 596 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 HADHBP55084 474 aaKnown RBP10.21□□□□□ -0.77
CLK3-205ENST00000561673 TMPRSS3P57727 454 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms