RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	CSGALNACT1	Q8TDX6	532 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	WFIKKN2	Q8TEU8	576 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	STYX	Q8WUJ0	223 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	PDCD6IP	Q8WUM4	868 aa	Known RBP	7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	CKAP2	Q8WWK9	683 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	PTPRN2	Q92932	1015 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	TCEAL3	Q969E4	200 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	HDAC10	Q969S8	669 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	E2F7	Q96AV8	911 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	VOPP1	Q96AW1	172 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	ATXN7L3B	Q96GX2	97 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	VPS39	Q96JC1	886 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	ZFYVE19	Q96K21	471 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	TUBGCP5	Q96RT8	1024 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	SRPK1	Q96SB4	655 aa	Known RBP	7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	GPR22	Q99680	433 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	FAM83C	Q9BQN1	747 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	RHOJ	Q9H4E5	214 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	NLE1	Q9NVX2	485 aa	Predicted RBP	7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	THG1L	Q9NWX6	298 aa	Known RBP	7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	HACD3	Q9P035	362 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC17A7	Q9P2U7	560 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	EVL	Q9UI08	416 aa	Predicted RBP	7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	RPL26L1	Q9UNX3	145 aa	Known RBP	7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC27A6	Q9Y2P4	619 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	MTO1	Q9Y2Z2	717 aa	Known RBP	7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	KCTD3	Q9Y597	815 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	PCDHB9	Q9Y5E1	797 aa		7.52	□□□□□ -1.21
TPM1-231	ENST00000561395	CCDC162P	A2VCL2	907 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	GMNC	A6NCL1	334 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	C2orf81	A6NN90	581 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	WASH3P	C4AMC7	463 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CCL22	O00626	93 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	BUD23	O43709	281 aa	Known RBP	7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	FAM107A	O95990	144 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	AHSG	P02765	367 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	ASL	P04424	464 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	DRD4	P21917	467 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	LPO	P22079	712 aa	Predicted RBP	7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	GABRB3	P28472	473 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	SERPINA4	P29622	427 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	GK	P32189	559 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC8A1	P32418	973 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CRHR1	P34998	444 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	HADHA	P40939	763 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	ETV4	P43268	484 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	ABCG1	P45844	678 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	LEPR	P48357	1165 aa	Known RBP	7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CD151	P48509	253 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	POLD2	P49005	469 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	DGKG	P49619	791 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CSRP3	P50461	194 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	SEC24C	P53992	1094 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	EPHB1	P54762	984 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	PRAME	P78395	509 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	PDE1B	Q01064	536 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	FCHO2	Q0JRZ9	810 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CTBP1	Q13363	440 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	PDE1C	Q14123	709 aa	Predicted RBP	7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	GRM3	Q14832	879 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	DLG2	Q15700	870 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	MYLK3	Q32MK0	819 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CARD16	Q5EG05	197 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	HHAT	Q5VTY9	493 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	KIAA1211L	Q6NV74	962 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	LVRN	Q6Q4G3	990 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	AFTPH	Q6ULP2	937 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	VIT	Q6UXI7	678 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395		Q6ZS52	159 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	MICALCL	Q6ZW33	695 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CMC1	Q7Z7K0	106 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	PDZD3	Q86UT5	571 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	KBTBD6	Q86V97	674 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	TAX1BP1	Q86VP1	789 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	C12orf40	Q86WS4	652 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CAMK1D	Q8IU85	385 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CILP2	Q8IUL8	1156 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	MFSD6L	Q8IWD5	586 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	LMNTD2	Q8IXW0	634 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	NDUFAF2	Q8N183	169 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	MDGA1	Q8NFP4	955 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	OR13C4	Q8NGS5	318 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	GPR150	Q8NGU9	434 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	OR6P1	Q8NGX9	317 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	FRS2	Q8WU20	508 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	PIH1D2	Q8WWB5	315 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	GAB3	Q8WWW8	586 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CHMP6	Q96FZ7	201 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CABS1	Q96KC9	395 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	MRGPRX3	Q96LB0	322 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	MAGEB18	Q96M61	343 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF317	Q96PQ6	595 aa	Predicted RBP	7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	SMIM14	Q96QK8	99 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	TRMT61B	Q9BVS5	477 aa	Known RBP	7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	IQCG	Q9H095	443 aa	Known RBP	7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	EBF3	Q9H4W6	596 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	ECT2	Q9H8V3	914 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	MAGEE1	Q9HCI5	957 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	ZFP14	Q9HCL3	533 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	HPS4	Q9NQG7	708 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms