RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PLEKHM1Q9Y4G2 1056 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 PCDHA13Q9Y5I0 950 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 ALG6Q9Y672 507 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 CCDC187A0A096LP49 1063 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 FADS2P1A8MWK0 482 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 ANKRD66B4E2M5 251 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 CST8O60676 142 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 PYGLP06737 847 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 PIRTP0C851 137 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 SPINT3P49223 89 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 CTBSQ01459 385 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 ADCY2Q08462 1091 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 PRKD1Q15139 912 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 SPA17Q15506 151 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 NT5DC3Q86UY8 548 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 CCDC50Q8IVM0 306 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 ZNF248Q8NDW4 579 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 SPATA22Q8NHS9 363 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 WDR36Q8NI36 951 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 HAUS1Q96CS2 278 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 PRR11Q96HE9 360 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 COX14Q96I36 57 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 WDR24Q96S15 920 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 ADGRE3Q9BY15 652 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 THSD1Q9NS62 852 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 LRIT1Q9P2V4 623 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 APPL1Q9UKG1 709 aa17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 OAS3Q9Y6K5 1087 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-208ENST00000561271 FASNP49327 2511 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 AGRPO00253 132 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 ASMTLO95671 621 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 MT-CYBP00156 380 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 ATP1A1P05023 1023 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 FGF1P05230 155 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 PTPN3P26045 913 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 RBMS1P29558 406 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 CYLC1P35663 651 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 ACTR1BP42025 376 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 ERVPABLB-1P60509 514 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 ACTR1AP61163 376 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 TLE3Q04726 772 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 TFDP2Q14188 446 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 HENMT1Q5T8I9 393 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 C11orf63Q6NUN7 778 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 CCDC170Q8IYT3 715 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 KATNAL2Q8IYT4 538 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 EXD1Q8NHP7 514 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 KRT35Q92764 455 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 SCARF2Q96GP6 870 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 LIN37Q96GY3 246 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 MRFAP1L1Q96HT8 127 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 SLC25A51Q9H1U9 297 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 GLOD4Q9HC38 313 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 PCDHGA8Q9Y5G5 932 aa17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 PCYT1BQ9Y5K3 369 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-208ENST00000561271 hCG_1818297A0A087WSY0 165 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 A0A0A6YYK5 440 aaPredicted RBP17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 NUDT21O43809 227 aaKnown RBP17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 PMPCBO75439 489 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 ECEL1O95672 775 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 INHBCP55103 352 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 MAP9Q49MG5 647 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 PYCR3Q53H96 274 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 TFDP3Q5H9I0 405 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 IGF2-ASQ6U949 168 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZC3H18Q86VM9 953 aaKnown RBP17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 NLRP8Q86W28 1048 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 GALNT13Q8IUC8 556 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 NAGSQ8N159 534 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 CCHCR1Q8TD31 782 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 TFB1MQ8WVM0 346 aaKnown RBP17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 KCNE4Q8WWG9 221 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 TADA1Q96BN2 335 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 EID2BQ96D98 161 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 SLC46A1Q96NT5 459 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 FCRL3Q96P31 734 aaPredicted RBP17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 FAM83DQ9H4H8 585 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 LUC7LQ9NQ29 371 aaKnown RBP17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 UBP1Q9NZI7 540 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 SHOC2Q9UQ13 582 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZNF711Q9Y462 761 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 PRKAB1Q9Y478 270 aa17.08■□□□□ 0.32
CDC42BPB-208ENST00000561271 ATMQ13315 3056 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 RCCD1A6NED2 376 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 CDRT15L2A8MXV6 281 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 F5H423 210 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 TNFSF15O95150 251 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 NDUFA10O95299 355 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 HGFP14210 728 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 PNLIPP16233 465 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 NFKB1P19838 968 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 CCKBRP32239 447 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 NR2C2P49116 596 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 CDK18Q07002 472 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 WASHC5Q12768 1159 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 SLC14A2Q15849 920 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 TEX44Q53QW1 395 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms