RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 RNF219Q5W0B1 726 aaPredicted RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 ANKS6Q68DC2 871 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 RETSATQ6NUM9 610 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 METTL2BQ6P1Q9 378 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 SLC39A5Q6ZMH5 540 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 Q6ZNB5 142 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 LARP4Q71RC2 724 aaKnown RBP eCLIP9.67□□□□□ -0.86
RTF1-206ENST00000560447 CFAP52Q8N1V2 620 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 TTC30BQ8N4P2 665 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 OR4K2Q8NGD2 314 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 OR13C4Q8NGS5 318 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 DTX3LQ8TDB6 740 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 ZNF296Q8WUU4 475 aaPredicted RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 KCNJ9Q92806 393 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 PPP2R3CQ969Q6 453 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 ACDQ96AP0 544 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 ROPN1LQ96C74 230 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 CATSPER2Q96P56 530 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 BTBD9Q96Q07 612 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 TTC1Q99614 292 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 ECSITQ9BQ95 431 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 VN1R3Q9BXE9 311 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 MUC3BQ9H195 1237 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 CXorf56Q9H5V9 222 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 WDR41Q9HAD4 459 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 RC3H2Q9HBD1 1191 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 CYP4F11Q9HBI6 524 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 MAGEE1Q9HCI5 957 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 POLR3BQ9NW08 1133 aaPredicted RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 SPG21Q9NZD8 308 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 LHX3Q9UBR4 397 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 SUCOQ9UBS9 1254 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 LSM7Q9UK45 103 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 KCTD3Q9Y597 815 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 MAGEA13PA6NCF6 341 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 NEMP2A6NFY4 417 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 A6NHS1 94 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SOBPA7XYQ1 873 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 H3BMM5 538 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 PSMD12O00232 456 aaPredicted RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 AIM2O14862 343 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 AZIN1O14977 448 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 PQBP1O60828 265 aaKnown RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 BCAS2O75934 225 aaPredicted RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 TMCC1O94876 653 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 MATN4O95460 622 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 MLYCDO95822 493 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 C1RP00736 705 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SNRPB2P08579 225 aaKnown RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 RPS17P08708 135 aaKnown RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 MBL2P11226 248 aaPredicted RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 PCSK2P16519 638 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SESN3P58005 492 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SLC7A9P82251 487 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 ARF5P84085 180 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 CACNG1Q06432 222 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 FOXM1Q08050 763 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 LCP2Q13094 533 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SEMA3AQ14563 771 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 KANK2Q63ZY3 851 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 ANO7Q6IWH7 933 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 OGFOD2Q6N063 350 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 RTL10Q7L3V2 364 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SPATA19Q7Z5L4 167 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 FBXO39Q8N4B4 442 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 PTGR2Q8N8N7 351 aaPredicted RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 ZNF557Q8N988 423 aaPredicted RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 GOLM1Q8NBJ4 401 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 PCYOX1LQ8NBM8 494 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 LPCAT1Q8NF37 534 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 GRIN3AQ8TCU5 1115 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 AGR3Q8TD06 166 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SLC26A7Q8TE54 656 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 PTERQ96BW5 349 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 RCN3Q96D15 328 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SGF29Q96ES7 293 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 DUS3LQ96G46 650 aaKnown RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 SCLYQ96I15 445 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 C2orf49Q9BVC5 232 aaPredicted RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 TMUB1Q9BVT8 246 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 NUDT4Q9NZJ9 180 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 EPS15L1Q9UBC2 864 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 TRMT6Q9UJA5 497 aaKnown RBP9.66□□□□□ -0.86
RTF1-206ENST00000560447 TBX21Q9UL17 535 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 CRYL1Q9Y2S2 319 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 SPO11Q9Y5K1 396 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 OR51B4Q9Y5P0 310 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 INSL5Q9Y5Q6 135 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
RTF1-206ENST00000560447 A0A1W2PQ67 120 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 DYTNA2CJ06 578 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 OR51F1A6NGY5 319 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 H0Y626 953 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 CBX4O00257 560 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 PRRG1O14668 218 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 TBL1XO60907 577 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 SMNDC1O75940 238 aaKnown RBP eCLIP9.65□□□□□ -0.86
RTF1-206ENST00000560447 CDK14O94921 469 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 CD160O95971 181 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms