RNA–Protein interactions for RNA: ENST00000560045.1

IGKV2D-40-202, Transcript of immunoglobulin kappa variable 2D-40, humanhuman

APPRIS ALT2 BASIC

Gene IGKV2D-40, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-40-202ENST00000560045 UCNP55089 124 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 COPS2P61201 443 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CDK18Q07002 472 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ZFP36L1Q07352 338 aaKnown RBP10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 AP1B1Q10567 949 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 XRCC4Q13426 336 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 PTPRRQ15256 657 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 PYCR3Q53H96 274 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 C3orf38Q5JPI3 329 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 DENND2CQ68D51 928 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 NPNTQ6UXI9 565 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 BBS12Q6ZW61 710 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 TMTC1Q8IUR5 882 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 SLITRK4Q8IW52 837 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 NAGSQ8N159 534 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 FAM46DQ8NEK8 389 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CCL4L1Q8NHW4 92 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ZDHHC1Q8WTX9 485 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 SNRNP27Q8WVK2 155 aaKnown RBP10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 TFB1MQ8WVM0 346 aaKnown RBP10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 SCAMP4Q969E2 229 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 RNF25Q96BH1 459 aaPredicted RBP10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CCDC97Q96F63 343 aaPredicted RBP10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ATXN7L3BQ96GX2 97 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 SLC46A1Q96NT5 459 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 QKIQ96PU8 341 aaKnown RBP eCLIP10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 DPH1Q9BZG8 443 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 B3GNT4Q9C0J1 378 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 GLOD4Q9HC38 313 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 TAAR2Q9P1P5 351 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 GULP1Q9UBP9 304 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 SATB2Q9UPW6 733 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ST14Q9Y5Y6 855 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 PTPRQQ9UMZ3 2332 aa10.85□□□□□ -0.67
IGKV2D-40-202ENST00000560045 FADS2P1A8MWK0 482 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 PJA2O43164 708 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CST8O60676 142 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ZRANB2O95218 330 aaKnown RBP eCLIP10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 IPO7O95373 1038 aaKnown RBP10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 NDST3O95803 873 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 RPLP0P05388 317 aaKnown RBP10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 PECAM1P16284 738 aaPredicted RBP10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CTNNA2P26232 953 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 NOP2P46087 812 aaKnown RBP10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 GNPDA1P46926 289 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CLCNKAP51800 687 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 INHBCP55103 352 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CTBSQ01459 385 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 TLE3Q04726 772 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 WASHC5Q12768 1159 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 SQSTM1Q13501 440 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 NOMO1Q15155 1222 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 RFLNAQ6ZTI6 216 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 TMC3Q7Z5M5 1100 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 GALNT13Q8IUC8 556 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 SPACA3Q8IXA5 215 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 RCOR2Q8IZ40 523 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ARL14Q8N4G2 192 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 TRAM1L1Q8N609 369 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 P3H4Q92791 437 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 PLEKHG4BQ96PX9 1271 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 VPS35Q96QK1 796 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 SMIM14Q96QK8 99 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 FCRL5Q96RD9 977 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 AGAP2Q99490 1192 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 DPYSL5Q9BPU6 564 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ZSCAN5AQ9BUG6 496 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 RIOK2Q9BVS4 552 aaKnown RBP10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 STRADBQ9C0K7 418 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CARD9Q9H257 536 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 DPEP2Q9H4A9 486 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 FAM83DQ9H4H8 585 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 TRABDQ9H4I3 376 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 PRORYQ9H606 182 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ZFYVE1Q9HBF4 777 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 LRIT1Q9P2V4 623 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CD84Q9UIB8 345 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 CNOT6Q9ULM6 557 aaKnown RBP10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ZNF711Q9Y462 761 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 HYOU1Q9Y4L1 999 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 RNF215Q9Y6U7 377 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 IGSF10Q6WRI0 2623 aa10.84□□□□□ -0.67
IGKV2D-40-202ENST00000560045 LOC285095A0A1B0GVY8 99 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 CCDC66A2RUB6 948 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 A6NCN8 305 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 GOLGA6CA6NDK9 693 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 GOLGA6BA6NDN3 693 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 PLD2O14939 933 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 CPNE6O95741 557 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 FGF1P05230 155 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 GOLGA6DP0CG33 693 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 HLA-DPA1P20036 260 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 AK4P27144 223 aaPredicted RBP10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 RBMS1P29558 406 aaKnown RBP10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 CD68P34810 354 aaPredicted RBP10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 ACTR1BP42025 376 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 MARCKSL1P49006 195 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 VAV2P52735 878 aa10.83□□□□□ -0.68
IGKV2D-40-202ENST00000560045 ACTR1AP61163 376 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms