RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PRPSAP1Q14558 356 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 MORF4L2Q15014 288 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 CWF19L1Q69YN2 538 aaKnown RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 CASC4Q6P4E1 433 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 NXPE4Q6UWF7 544 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 KIAA1324Q6UXG2 1013 aaKnown RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 GDPD4Q6W3E5 623 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ZNF852Q6ZMS4 543 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ZNF765Q7L2R6 523 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 TMC3Q7Z5M5 1100 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 FAM124AQ86V42 546 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 SULF2Q8IWU5 870 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ZBED8Q8IZ13 594 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 AADATQ8N5Z0 425 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 PAF1Q8N7H5 531 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 FRMD1Q8N878 549 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ZNF557Q8N988 423 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 DNAAF3Q8N9W5 541 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 FBXO36Q8NEA4 188 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 MDGA1Q8NFP4 955 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 OR13C4Q8NGS5 318 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 OR2W6PQ8NHA6 318 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 PIP4K2CQ8TBX8 421 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 CCHCR1Q8TD31 782 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 FBF1Q8TES7 1133 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 UCMAQ8WVF2 138 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 HMGB4Q8WW32 186 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 PIH1D2Q8WWB5 315 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 OR8D1Q8WZ84 308 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 EID2BQ96D98 161 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 RMDN1Q96DB5 314 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 FEM1CQ96JP0 617 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 UHRF1Q96T88 793 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 GABRG3Q99928 467 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 FERMT1Q9BQL6 677 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 HEPHQ9BQS7 1158 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 TPSD1Q9BZJ3 242 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 MKRN2Q9H000 416 aaKnown RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 EPB41L4BQ9H329 900 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 CDC42EP4Q9H3Q1 356 aaKnown RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 SEMA4AQ9H3S1 761 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 GSX1Q9H4S2 264 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 ATP13A3Q9H7F0 1226 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 LMAN1LQ9HAT1 526 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 BPIFA1Q9NP55 256 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 PCDH12Q9NPG4 1184 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 CASS4Q9NQ75 786 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 EIF2B3Q9NR50 452 aaKnown RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 CHRAC1Q9NRG0 131 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 NINJ2Q9NZG7 142 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 CRIM1Q9NZV1 1036 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 B4GALT6Q9UBX8 382 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 FEZ2Q9UHY8 353 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 COQ6Q9Y2Z9 468 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ARL5AQ9Y689 179 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 MAD1L1Q9Y6D9 718 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 TECTAO75443 2155 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 BDP1A6H8Y1 2624 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 LOC285095A0A1B0GVY8 99 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 KANSL1LA0AUZ9 987 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 FAM86C2PA6NEL3 165 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 PRR23AA6NEV1 266 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 CAPN8A6NHC0 703 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 C16orf96A6NNT2 1141 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 FOXO6A8MYZ6 492 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 E7ESA3 106 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 TMPRSS2O15393 492 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 SYNCRIPO60506 623 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 UGT1A9O60656 530 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 CLDN7O95471 211 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 NDST3O95803 873 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 C1SP09871 688 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 H2AFXP16104 143 aaPredicted RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 GABRG2P18507 467 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 SERPINA4P29622 427 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 SSTR1P30872 391 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 NTSR1P30989 418 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 HNF1BP35680 557 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 HSPA9P38646 679 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 NNMTP40261 264 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 P2RY2P41231 377 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 EPHB1P54762 984 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 DRG2P55039 364 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 STARD6P59095 220 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 RPS14P62263 151 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 SATB1Q01826 763 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 PRKCQQ04759 706 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 SLC20A2Q08357 652 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 NSUN2Q08J23 767 aaKnown RBP eCLIP5.22□□□□□ -1.57
SPG11-220ENST00000559933 DMWDQ09019 674 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 CNTN1Q12860 1018 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 CAMK2GQ13555 558 aaPredicted RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 ELAVL3Q14576 367 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 NUMA1Q14980 2115 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 CST6Q15828 149 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 KYNUQ16719 465 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 MSMPQ1L6U9 139 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 PIP5KL1Q5T9C9 394 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 ARMC12Q5T9G4 340 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 AGBL4Q5VU57 503 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms