RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SPATS1Q496A3 300 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 DCAF6Q58WW2 860 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 RARS2Q5T160 578 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 DAB2IPQ5VWQ8 1189 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 DHRS7BQ6IAN0 325 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 METTL2BQ6P1Q9 378 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 C11orf88Q6PI97 169 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 TRAT1Q6PIZ9 186 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SUSD1Q6UWL2 747 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 GET4Q7L5D6 327 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 CACNA2D4Q7Z3S7 1137 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 HAUS6Q7Z4H7 955 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SPATA21Q7Z572 469 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 CENPVQ7Z7K6 275 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 ZSCAN30Q86W11 494 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SFTPA2Q8IWL1 248 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 MCEMP1Q8IX19 187 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SIX6OS1Q8N1H7 587 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PI4KAP1Q8N8J0 262 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SPC24Q8NBT2 197 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 RBM15BQ8NDT2 890 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 CTCFLQ8NI51 663 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 WIPF2Q8TF74 440 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SLC35F5Q8WV83 523 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 KCNE4Q8WWG9 221 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 LARP4BQ92615 738 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 FAM162AQ96A26 154 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 LRRC59Q96AG4 307 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 NXNL1Q96CM4 212 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 HES6Q96HZ4 224 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 METTL2AQ96IZ6 378 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SLC41A2Q96JW4 573 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 AGAP2Q99490 1192 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 FAM118BQ9BPY3 351 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SLC25A23Q9BV35 468 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 C1QTNF3Q9BXJ4 246 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 DNAI2Q9GZS0 605 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SPATC1LQ9H0A9 340 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 ST6GALNAC4Q9H4F1 302 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PPP1R3EQ9H7J1 279 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 EPB41L5Q9HCM4 733 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 DDX4Q9NQI0 724 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PDGFCQ9NRA1 345 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 THSD1Q9NS62 852 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 ACSS1Q9NUB1 689 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 DDX43Q9NXZ2 648 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 WSB2Q9NYS7 404 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 GDE1Q9NZC3 331 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 STK26Q9P289 416 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SLC9A2Q9UBY0 812 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 STK39Q9UEW8 545 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SLC24A2Q9UI40 661 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 DBNLQ9UJU6 430 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PACSIN3Q9UKS6 424 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 TTC7AQ9ULT0 858 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 BTBD3Q9Y2F9 522 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 KLHL20Q9Y2M5 609 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 CLIC4Q9Y696 253 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 KANSL1LA0AUZ9 987 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 BICDL2A1A5D9 508 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 EIF4E1BA6NMX2 242 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 MAGEB17A8MXT2 336 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 MAP2K7O14733 419 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 HS3ST1O14792 307 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SMAD9O15198 467 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SLC7A4O43246 635 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ZBTB43O43298 467 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 RAMP2O60895 175 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 RECQL5O94762 991 aaPredicted RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 EGFP01133 1207 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 GH2P01242 217 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 GCP02774 474 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 WNT1P04628 370 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ICAM1P05362 532 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CHRNB1P11230 501 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 C6P13671 934 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 PFKFB1P16118 471 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 PDGFRAP16234 1089 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 GPTP24298 496 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CHATP28329 748 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ACADLP28330 430 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 NMBRP28336 390 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 HOXC9P31274 260 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 DCTDP32321 178 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 PCGF2P35227 344 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 HNF4AP41235 474 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ARHGAP25P42331 645 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CXCR3P49682 368 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 METAP2P50579 478 aaKnown RBP eCLIP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF75DP51815 510 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CXCL9Q07325 125 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 DDR1Q08345 913 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 MZT1Q08AG7 82 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 COASYQ13057 564 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 MAD2L1Q13257 205 aaPredicted RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 RCN2Q14257 317 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 NFE2L1Q14494 772 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SLMAPQ14BN4 828 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 HYAL4Q2M3T9 481 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms