RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 RAD51BO15315 384 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 ZNF821O75541 412 aaPredicted RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 ZMPSTE24O75844 475 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 NEBLO76041 1014 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 TMCC1O94876 653 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 ATP1A3P13637 1013 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 CKMT2P17540 419 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 ENDOUP21128 410 aaKnown RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 XPAP23025 273 aaPredicted RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 DGKAP23743 735 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 L1CAMP32004 1257 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 NUDT1P36639 197 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 ETFBP38117 255 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 PTPN9P43378 593 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 RHOAP61586 193 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 RPL7AP62424 266 aaKnown RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 TARDBPQ13148 414 aaKnown RBP eCLIP7.42□□□□□ -1.22
SPG11-213ENST00000558988 SGCGQ13326 291 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 PDE1CQ14123 709 aaPredicted RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 SMAD1Q15797 465 aaKnown RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 CT47A1Q5JQC4 288 aaPredicted RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 SPDYAQ5MJ70 313 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 CCDC183Q5T5S1 534 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 BORAQ6PGQ7 559 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 WDR59Q6PJI9 974 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 ZNF783Q6ZMS7 281 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 GCNT7Q6ZNI0 430 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 SLFN11Q7Z7L1 901 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 VPS36Q86VN1 386 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 IQCHQ86VS3 1027 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 ALG3Q92685 438 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 NXPE2Q96DL1 559 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 CELF6Q96J87 481 aaKnown RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 FEM1CQ96JP0 617 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 KLHL32Q96NJ5 620 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 AGPAT1Q99943 283 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 NCAPGQ9BPX3 1015 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 WRAP53Q9BUR4 548 aaKnown RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 SLC17A9Q9BYT1 436 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 DEF6Q9H4E7 631 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 SYNDIG1Q9H7V2 258 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 PPARGC1AQ9UBK2 798 aaKnown RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 ZNF212Q9UDV6 495 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 LIMA1Q9UHB6 759 aaKnown RBP7.42□□□□□ -1.22
SPG11-213ENST00000558988 LAMA1P25391 3075 aa7.42□□□□□ -1.22
SPG11-213ENST00000558988 CACNA1GO43497 2377 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 POM121BA6NF01 834 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 C16orf96A6NNT2 1141 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 RASA4BC9J798 803 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 FPGTO14772 594 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 RASA4O43374 803 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 PIAS2O75928 621 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 CD160O95971 181 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 IGSF6O95976 241 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 UNGP13051 313 aaPredicted RBP7.41□□□□□ -1.22
SPG11-213ENST00000558988 DESP17661 470 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 TNFAIP3P21580 790 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 PSMA2P25787 234 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 RXRGP48443 463 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 LIG3P49916 1009 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 THOP1P52888 689 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 GEMIN4P57678 1058 aaKnown RBP7.41□□□□□ -1.22
SPG11-213ENST00000558988 TPI1P60174 286 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 SNRPD1P62314 119 aaKnown RBP7.41□□□□□ -1.22
SPG11-213ENST00000558988 RPS21P63220 83 aaKnown RBP7.41□□□□□ -1.22
SPG11-213ENST00000558988 RNF4P78317 190 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 SLC20A2Q08357 652 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 OVGP1Q12889 678 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 PTP4A2Q12974 167 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 FGL2Q14314 439 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 ANO6Q4KMQ2 910 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 ZNF805Q5CZA5 627 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 CFAP58Q5T655 872 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 ACBD5Q5T8D3 534 aaPredicted RBP7.41□□□□□ -1.22
SPG11-213ENST00000558988 MEI1Q5TIA1 1274 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 MANEALQ5VSG8 457 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 SFMBT2Q5VUG0 894 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 KIAA1161Q6NSJ0 714 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 CRTC1Q6UUV9 634 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 MON1BQ7L1V2 547 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 STRADAQ7RTN6 431 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 BNIPLQ7Z465 357 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 TTC7BQ86TV6 843 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 NLRP14Q86W24 1093 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 TMPRSS12Q86WS5 348 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 SLC22A18ASQ8N1D0 253 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 SLC25A45Q8N413 288 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 TMEM145Q8NBT3 493 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 C3orf20Q8ND61 904 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 OR2AP1Q8NGE2 309 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 ARHGEF2Q92974 986 aaKnown RBP7.41□□□□□ -1.22
SPG11-213ENST00000558988 FAM131CQ96AQ9 280 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 HMCESQ96FZ2 354 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 GDAP1L1Q96MZ0 367 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 MAGEH1Q9H213 219 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 ERVMER34-1Q9H9K5 563 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 AP5S1Q9NUS5 200 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 KLHL11Q9NVR0 708 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 TMEM248Q9NWD8 314 aa7.41□□□□□ -1.22
SPG11-213ENST00000558988 TAS2R14Q9NYV8 317 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms