RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	SNRPB	P14678	240 aa	Known RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	LPO	P22079	712 aa	Predicted RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	DDX6	P26196	483 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	WEE1	P30291	646 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	HNRNPH1	P31943	449 aa	Known RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	HADHA	P40939	763 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	SCTR	P47872	440 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	SLC1A6	P48664	564 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	STC1	P52823	247 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	XIAP	P98170	497 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	POU4F1	Q01851	419 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	BNIP1	Q12981	228 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CDKN3	Q16667	212 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	GEN1	Q17RS7	908 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TYSND1	Q2T9J0	566 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CCDC153	Q494R4	210 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ARHGAP15	Q53QZ3	475 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TCEAL5	Q5H9L2	206 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ATG16L1	Q676U5	607 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	LRRC8E	Q6NSJ5	796 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	LYSMD3	Q7Z3D4	306 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	MAVS	Q7Z434	540 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	GALNT7	Q86SF2	657 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TTC7B	Q86TV6	843 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	MTDH	Q86UE4	582 aa	Known RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	C12orf40	Q86WS4	652 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	RGL4	Q8IZJ4	473 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CHST14	Q8NCH0	376 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	OR2AP1	Q8NGE2	309 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	SGF29	Q96ES7	293 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	MYO19	Q96H55	970 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ZFYVE19	Q96K21	471 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	UBXN10	Q96LJ8	280 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	EBF4	Q9BQW3	602 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	GATA5	Q9BWX5	397 aa	Predicted RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TMEM120A	Q9BXJ8	343 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	NKX2-4	Q9H2Z4	354 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CATSPERZ	Q9NTU4	200 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	PNPO	Q9NVS9	261 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	HAUS2	Q9NVX0	235 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	XPR1	Q9UBH6	696 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	HEY2	Q9UBP5	337 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TLK1	Q9UKI8	766 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	SLC12A4	Q9UP95	1085 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TRIM33	Q9UPN9	1127 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	HS3ST2	Q9Y278	367 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	VWA7	Q9Y334	891 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	PLXNB3	Q9ULL4	1909 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602		A0A0J9YYE9	177 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	C2orf81	A6NN90	581 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ZNF195	O14628	629 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	LINC01565	O15544	149 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	FSBP	O95073	299 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CLDN7	O95471	211 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	FGF19	O95750	216 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TRBC1	P01850	177 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	SERPINE1	P05121	402 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CHRNG	P07510	517 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CCDC166	P0CW27	439 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TROVE2	P10155	538 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	COL6A2	P12110	1019 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	FDXR	P22570	491 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	PAX7	P23759	505 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	SERPINB3	P29508	390 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	FMO4	P31512	558 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	MC4R	P32245	332 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	HNF1B	P35680	557 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CSNK1D	P48730	415 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CLCN5	P51795	746 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ARFIP2	P53365	341 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	NCALD	P61601	193 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	AP1S1	P61966	158 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	BCL2L1	Q07817	233 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ACTN3	Q08043	901 aa	Predicted RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TUBB3	Q13509	450 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	DHCR24	Q15392	516 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	DUSP6	Q16828	381 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ACCSL	Q4AC99	568 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TECRL	Q5HYJ1	363 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	LRRC73	Q5JTD7	316 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ARMC12	Q5T9G4	340 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	C22orf39	Q6P5X5	142 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ZYG11A	Q6WRX3	759 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	DPY19L3	Q6ZPD9	716 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	RFLNA	Q6ZTI6	216 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602		Q6ZVU0	165 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	RPS27L	Q71UM5	84 aa	Known RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TSPAN33	Q86UF1	283 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	SFTPA1	Q8IWL2	248 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TRIM42	Q8IWZ5	723 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	NPAS3	Q8IXF0	933 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	LSMEM2	Q8N112	164 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	RYBP	Q8N488	228 aa	Predicted RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	TXNDC5	Q8NBS9	432 aa	Known RBP	4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	RAB3IL1	Q8TBN0	382 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	CYB5D2	Q8WUJ1	264 aa		4.88	□□□□□ -1.63
IDH3A-208	ENST00000558602	LPGAT1	Q92604	370 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms