RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 BUD23O43709 281 aaKnown RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 TNFP01375 233 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 ALPPL2P10696 532 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 CTSEP14091 401 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 BPIP17213 487 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 RPL22P35268 128 aaKnown RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 LMAN1P49257 510 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 C1orf61Q13536 156 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 HS1BP3Q53T59 392 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 PAPD7Q5XG87 772 aaKnown RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 KCTD16Q68DU8 428 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 DENND5AQ6IQ26 1287 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 DOK6Q6PKX4 331 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 TRIM74Q86UV6 250 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 SLC25A45Q8N413 288 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 BAHD1Q8TBE0 780 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 OR1E3Q8WZA6 343 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 HIC2Q96JB3 615 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 CDC6Q99741 560 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 LRRC61Q9BV99 259 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 ARNT2Q9HBZ2 717 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 CYP4F12Q9HCS2 524 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 MRPL40Q9NQ50 206 aaKnown RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 RAB6BQ9NRW1 208 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 IL17CQ9P0M4 197 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 NFKBIL1Q9UBC1 381 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 FTSJ1Q9UET6 329 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 FEZ2Q9UHY8 353 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 PKP3Q9Y446 797 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 ARL5AQ9Y689 179 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 COL5A1P20908 1838 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 CACNA1AO00555 2505 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 ZFC3H1O60293 1989 aaKnown RBP12.29□□□□□ -0.44
SMAD3-205ENST00000558428 PRSS38A1L453 326 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 C2orf81A6NN90 581 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 ERI2A8K979 691 aaKnown RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 FADS2P1A8MWK0 482 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 TNFRSF10CO14798 259 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 STX7O15400 261 aaKnown RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 CRTAMO95727 393 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 LDOC1O95751 146 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 SIM1P81133 766 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 SEMA5AQ13591 1074 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 ELOCQ15369 112 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 TCEA2Q15560 299 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 TAF1AQ15573 450 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 CYP1B1Q16678 543 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 C4orf22Q6V702 233 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 LINC00523Q86TU6 105 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 TRAM1L1Q8N609 369 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 OR4C6Q8NH72 309 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 BRSK1Q8TDC3 778 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 CNDP2Q96KP4 475 aaKnown RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 TBATAQ96M53 351 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 PLEKHG4BQ96PX9 1271 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 ZSCAN5AQ9BUG6 496 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 FRMD8Q9BZ67 464 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 SUDS3Q9H7L9 328 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 CARS2Q9HA77 564 aaKnown RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 PIH1D1Q9NWS0 290 aaKnown RBP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 NLGN3Q9NZ94 848 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMAD3-205ENST00000558428 DOLKQ9UPQ8 538 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 TMEM98Q9Y2Y6 226 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 SAR1BQ9Y6B6 198 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 CSNK1G3Q9Y6M4 447 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 DGKBQ9Y6T7 804 aa12.28□□□□□ -0.44
SMAD3-205ENST00000558428 ZNF106Q9H2Y7 1883 aaKnown RBP12.27□□□□□ -0.44
SMAD3-205ENST00000558428 TRIM38O00635 465 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 TNFSF14O43557 240 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 SIGLEC6O43699 453 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 PHF2O75151 1096 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 PPFIA2O75334 1257 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 ASMTLO95671 621 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 CEACAM5P06731 702 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 APRTP07741 180 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 CELA2BP08218 269 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 TPH1P17752 444 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 LPOP22079 712 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 COILP38432 576 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 SPAM1P38567 509 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 POLD2P49005 469 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 BASP1P80723 227 aaKnown RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 MSLNQ13421 630 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 KCTD19Q17RG1 926 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 DEFB133Q30KQ1 61 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 ZDHHC20Q5W0Z9 365 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 PDPK2PQ6A1A2 396 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 TTC27Q6P3X3 843 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 CCDC137Q6PK04 289 aaKnown RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 PPP1R21Q6ZMI0 780 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 ERMP1Q7Z2K6 904 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 GLRX5Q86SX6 157 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 FSTL5Q8N475 847 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 DNAAF3Q8N9W5 541 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 OR52K1Q8NGK4 314 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 COX14Q96I36 57 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 DUSP23Q9BVJ7 150 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 CLPBQ9H078 707 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms