RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 IL26Q9NPH9 171 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 TM7SF3Q9NS93 570 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 FADS2P1A8MWK0 482 aa25.4■■□□□ 1.66
SMAD6-202ENST00000557916 TTI1O43156 1089 aa25.4■■□□□ 1.66
SMAD6-202ENST00000557916 ZNF883P0CG24 379 aa25.4■■□□□ 1.66
SMAD6-202ENST00000557916 SARNPP82979 210 aaKnown RBP25.4■■□□□ 1.66
SMAD6-202ENST00000557916 IL9RQ01113 521 aa25.4■■□□□ 1.66
SMAD6-202ENST00000557916 SHBQ15464 509 aa25.4■■□□□ 1.66
SMAD6-202ENST00000557916 WHAMMP3Q1A5X7 153 aa25.4■■□□□ 1.66
SMAD6-202ENST00000557916 TMEM202A6NGA9 273 aa25.39■■□□□ 1.66
SMAD6-202ENST00000557916 AP3B1O00203 1094 aa25.39■■□□□ 1.66
SMAD6-202ENST00000557916 INPP4BO15327 924 aa25.39■■□□□ 1.66
SMAD6-202ENST00000557916 ZNF140P52738 457 aaPredicted RBP25.39■■□□□ 1.66
SMAD6-202ENST00000557916 SESN2P58004 480 aaPredicted RBP25.39■■□□□ 1.66
SMAD6-202ENST00000557916 LRRC8BQ6P9F7 803 aa25.39■■□□□ 1.66
SMAD6-202ENST00000557916 OR13C4Q8NGS5 318 aa25.39■■□□□ 1.66
SMAD6-202ENST00000557916 HIC2Q96JB3 615 aa25.39■■□□□ 1.66
SMAD6-202ENST00000557916 TMEM131Q92545 1883 aa25.39■■□□□ 1.65
SMAD6-202ENST00000557916 TP53BP1Q12888 1972 aaPredicted RBP25.39■■□□□ 1.65
SMAD6-202ENST00000557916 GLYATL1P3A0A0U1RQE8 302 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 YKT6O15498 198 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 CSF2P04141 144 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 NME1P15531 152 aaKnown RBP25.38■■□□□ 1.65
SMAD6-202ENST00000557916 TMPRSS15P98073 1019 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 SLC14A1Q13336 389 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 TUBB2AQ13885 445 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 CCDC38Q502W7 563 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 PDPK2PQ6A1A2 396 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 PPIL6Q8IXY8 311 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 OR56A4Q8NGH8 313 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 DTX3LQ8TDB6 740 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 C19orf43Q9BQ61 176 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 TRIM51Q9BSJ1 452 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 TUBB2BQ9BVA1 445 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 KLQ9UEF7 1012 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 KLF15Q9UIH9 416 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 CNOT6Q9ULM6 557 aaKnown RBP25.38■■□□□ 1.65
SMAD6-202ENST00000557916 PNMA8BQ9ULN7 279 aaPredicted RBP25.38■■□□□ 1.65
SMAD6-202ENST00000557916 MRFAP1Q9Y605 127 aa25.38■■□□□ 1.65
SMAD6-202ENST00000557916 TMEM63AO94886 807 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 EPHA8P29322 1005 aaPredicted RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 HADHAP40939 763 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 NPY2RP49146 381 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 SRP54P61011 504 aaKnown RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 HNRNPKP61978 463 aaKnown RBP eCLIP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 PPARDQ03181 441 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 BNIP3Q12983 259 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 LAMB3Q13751 1172 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 FAM151BQ6UXP7 276 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 ZNF534Q76KX8 674 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 TRIM74Q86UV6 250 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 TSACCQ96A04 125 aaPredicted RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 COX14Q96I36 57 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 DNAJC1Q96KC8 554 aaKnown RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 RANBP9Q96S59 729 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 BFARQ9NZS9 450 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 FKBPLQ9UIM3 349 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 PCDHGB2Q9Y5G2 931 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 SCN8AQ9UQD0 1980 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 HEATR9A2RTY3 570 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 MROH6A6NGR9 719 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 H3BM21 787 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 DNALI1O14645 258 aaPredicted RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 TNFRSF10CO14798 259 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 SDC3O75056 442 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 JUNDP17535 347 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 ADRA1DP25100 572 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 SUZ12Q15022 739 aaKnown RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 CHRNA6Q15825 494 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 ALG11Q2TAA5 492 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 ATP13A5Q4VNC0 1218 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 RNASEH2BQ5TBB1 312 aaKnown RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 RD3Q7Z3Z2 195 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 MAATS1Q7Z4T9 603 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 HID1Q8IV36 788 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 PHACTR4Q8IZ21 702 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 NAT8LQ8N9F0 302 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 MCUQ8NE86 351 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 STYXQ8WUJ0 223 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 FRMD8Q9BZ67 464 aaPredicted RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 CAAP1Q9H8G2 361 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 FGF22Q9HCT0 170 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 NLE1Q9NVX2 485 aaPredicted RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 APPL1Q9UKG1 709 aa25.37■■□□□ 1.65
SMAD6-202ENST00000557916 CDV3Q9UKY7 258 aaKnown RBP25.37■■□□□ 1.65
SMAD6-202ENST00000557916 GOLGA8MH3BSY2 632 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 PCDHGA12O60330 932 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 IVDP26440 423 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 BLKP51451 505 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 MRPS25P82663 173 aaKnown RBP25.36■■□□□ 1.65
SMAD6-202ENST00000557916 PCID2Q5JVF3 399 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 IZUMO3Q5VZ72 239 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 DOK6Q6PKX4 331 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 PCGF5Q86SE9 256 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 GATAD2AQ86YP4 633 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 RBFAQ8N0V3 343 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 PPHLN1Q8NEY8 458 aaKnown RBP25.36■■□□□ 1.65
SMAD6-202ENST00000557916 SAP25Q8TEE9 199 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 BTN2A2Q8WVV5 523 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 OR1E3Q8WZA6 343 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms