RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SCARF2Q96GP6 870 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-234ENST00000557703 DUSP23Q9BVJ7 150 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 RIOK2Q9BVS4 552 aaKnown RBP13.62□□□□□ -0.23
SHMT2-234ENST00000557703 SLC13A1Q9BZW2 595 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 DDX47Q9H0S4 455 aaKnown RBP13.62□□□□□ -0.23
SHMT2-234ENST00000557703 SMOC1Q9H4F8 434 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 CDV3Q9UKY7 258 aaKnown RBP13.62□□□□□ -0.23
SHMT2-234ENST00000557703 SPO11Q9Y5K1 396 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 CFAP54Q96N23 3096 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-234ENST00000557703 C4orf47A7E2U8 309 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 F5H423 210 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-234ENST00000557703 TPP1O14773 563 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 LDB2O43679 373 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 VEGFDO43915 354 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 RASGRP1O95267 797 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 PIRTP0C851 137 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 ZSCAN5DPP0CG00 497 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 CSRP1P21291 193 aaKnown RBP13.61□□□□□ -0.23
SHMT2-234ENST00000557703 ADCY8P40145 1251 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 GRK6P43250 576 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 HK3P52790 923 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 GPR33Q49SQ1 333 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 PCID2Q5JVF3 399 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 FAXCQ5TGI0 409 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 HEATR4Q86WZ0 1026 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 GPR26Q8NDV2 337 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 SCAMP4Q969E2 229 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 FUBP1Q96AE4 644 aaKnown RBP13.61□□□□□ -0.23
SHMT2-234ENST00000557703 COX14Q96I36 57 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 MYOCQ99972 504 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 SPATA16Q9BXB7 569 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 ZCCHC2Q9C0B9 1178 aaKnown RBP13.61□□□□□ -0.23
SHMT2-234ENST00000557703 SLC32A1Q9H598 525 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 MRM3Q9HC36 420 aaKnown RBP13.61□□□□□ -0.23
SHMT2-234ENST00000557703 IL26Q9NPH9 171 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 SMOXQ9NWM0 555 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 SMARCAL1Q9NZC9 954 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 NCKIPSDQ9NZQ3 722 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 SPASTQ9UBP0 616 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 KLQ9UEF7 1012 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 SLC17A4Q9Y2C5 497 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 SPTBN4Q9H254 2564 aa13.61□□□□□ -0.23
SHMT2-234ENST00000557703 GLYATL1P3A0A0U1RQE8 302 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 AGAP14A8MT82 685 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 KCNJ13O60928 360 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 USP12O75317 370 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 URI1O94763 535 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 SOD1P00441 154 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 TNFP01375 233 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 IVLP07476 585 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ALPPL2P10696 532 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 EPHA8P29322 1005 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 PPARGP37231 505 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 PTGIRP43119 386 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ZNF140P52738 457 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 SRP54P61011 504 aaKnown RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 LRP8Q14114 963 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 SPARCL1Q14515 664 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ELOCQ15369 112 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 LDLRAP1Q5SW96 308 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ENPP7Q6UWV6 458 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 PHYKPLQ8IUZ5 450 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 PLA2G15Q8NCC3 412 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 OR4K2Q8NGD2 314 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 OR52K1Q8NGK4 314 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 SAP25Q8TEE9 199 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 SCG3Q8WXD2 468 aaKnown RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 CPT1BQ92523 772 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ULK4Q96C45 1275 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ZNF514Q96K75 400 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 TTC1Q99614 292 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 CDC6Q99741 560 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 APOL2Q9BQE5 337 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 NAT9Q9BTE0 207 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 TRIM39Q9HCM9 518 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 EVA1BQ9NVM1 165 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 NLE1Q9NVX2 485 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 TRNAU1APQ9NX07 287 aaKnown RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 DLL3Q9NYJ7 618 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ASIC3Q9UHC3 531 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 CA5BQ9Y2D0 317 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 OR1A2Q9Y585 309 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ARL5AQ9Y689 179 aa13.6□□□□□ -0.23
SHMT2-234ENST00000557703 GOLGA4Q13439 2230 aaKnown RBP13.6□□□□□ -0.23
SHMT2-234ENST00000557703 ARID1BQ8NFD5 2236 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-234ENST00000557703 DNALI1O14645 258 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-234ENST00000557703 TM4SF5O14894 197 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 AURKAO14965 403 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 SCAMP1O15126 338 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 PIAS2O75928 621 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 SLC25A14O95258 325 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-234ENST00000557703 CDK4P11802 303 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 JUNDP17535 347 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 ACVR1Q04771 509 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 EIF2B5Q13144 721 aaKnown RBP13.59□□□□□ -0.23
SHMT2-234ENST00000557703 CBLBQ13191 982 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 PUM1Q14671 1186 aaKnown RBP eCLIP13.59□□□□□ -0.23
SHMT2-234ENST00000557703 MORF4L2Q15014 288 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 PTPRRQ15256 657 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms