RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ADARB1P78563 741 aaKnown RBP16.24■□□□□ 0.19
SHMT2-232ENST00000557487 CTBSQ01459 385 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 ZNF773Q6PK81 442 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 KCTD8Q6ZWB6 473 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 PTGR2Q8N8N7 351 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-232ENST00000557487 ZNF296Q8WUU4 475 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-232ENST00000557487 TMEM40Q8WWA1 233 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 KCTD14Q9BQ13 255 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-232ENST00000557487 DCUN1D5Q9BTE7 237 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 C1orf50Q9BV19 199 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 TDRD1Q9BXT4 1180 aaKnown RBP16.24■□□□□ 0.19
SHMT2-232ENST00000557487 PAIP1Q9H074 479 aaKnown RBP16.24■□□□□ 0.19
SHMT2-232ENST00000557487 SLC52A3Q9NQ40 469 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 RGS18Q9NS28 235 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 TMEM30AQ9NV96 361 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 SEPT3Q9UH03 358 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 B3GNT3Q9Y2A9 372 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 MAGEB3O15480 346 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 FKTNO75072 461 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 PAX3P23760 479 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 VARSP26640 1264 aaKnown RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 TPP2P29144 1249 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 RPL9P32969 192 aaKnown RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 GSK3BP49841 420 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 ADAM17P78536 824 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 PHEXP78562 749 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 ACVR1Q04771 509 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 NFYCQ13952 458 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 RCAN2Q14206 197 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 GEN1Q17RS7 908 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 GPR107Q5VW38 600 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 FAM117BQ6P1L5 589 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 TMEM207Q6UWW9 146 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 C17orf99Q6UX52 265 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 RPS27LQ71UM5 84 aaKnown RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 DNAJB3Q8WWF6 145 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 TUBGCP3Q96CW5 907 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 FCRL2Q96LA5 508 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 EGFL7Q9UHF1 273 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 LEF1Q9UJU2 399 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 RIMKLBQ9ULI2 386 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 GPR45Q9Y5Y3 372 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 MYLKQ15746 1914 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 INPP4BO15327 924 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 PRR35P0CG20 571 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 HGFP14210 728 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 LCP2Q13094 533 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 IRF5Q13568 498 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 TWF2Q6IBS0 349 aaKnown RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 MRNIPQ6NTE8 343 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 FAM171BQ6P995 826 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 SFRP1Q8N474 314 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 OR13F1Q8NGS4 319 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 TRUB1Q8WWH5 349 aaKnown RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 MYLPFQ96A32 169 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 PTERQ96BW5 349 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 ITPKCQ96DU7 683 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 PLEKHA8Q96JA3 519 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 C1orf74Q96LT6 269 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 RDH12Q96NR8 316 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 ACBD6Q9BR61 282 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 IL1RL2Q9HB29 575 aa16.23■□□□□ 0.19
SHMT2-232ENST00000557487 POLR3BQ9NW08 1133 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 PAIP2BQ9ULR5 123 aaKnown RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 HEMK1Q9Y5R4 338 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-232ENST00000557487 FAM149AA5PLN7 773 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 TULP3O75386 442 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 MT-CO1P00395 513 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 ALBP02768 609 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 SLC2A3P11169 496 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 CCNA2P20248 432 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 OGNP20774 298 aaKnown RBP16.22■□□□□ 0.19
SHMT2-232ENST00000557487 OXTRP30559 389 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 KCNC1P48547 511 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 LIPEQ05469 1076 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 BTG3Q14201 252 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-232ENST00000557487 CBX2Q14781 532 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-232ENST00000557487 MAPRE1Q15691 268 aaKnown RBP16.22■□□□□ 0.19
SHMT2-232ENST00000557487 CRY1Q16526 586 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 PCSK7Q16549 785 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 AARS2Q5JTZ9 985 aaKnown RBP16.22■□□□□ 0.19
SHMT2-232ENST00000557487 UMODL1-AS1Q8N2C9 162 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 SNX31Q8N9S9 440 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 OR6P1Q8NGX9 317 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 RAB2BQ8WUD1 216 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 SNRNP27Q8WVK2 155 aaKnown RBP16.22■□□□□ 0.19
SHMT2-232ENST00000557487 FBXL20Q96IG2 436 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 LRCH3Q96II8 777 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 MUC3BQ9H195 1237 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 ATXN3LQ9H3M9 355 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 SYTL2Q9HCH5 934 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 SFMBT1Q9UHJ3 866 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 POLG2Q9UHN1 485 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 OAS3Q9Y6K5 1087 aaKnown RBP16.22■□□□□ 0.19
SHMT2-232ENST00000557487 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
SHMT2-232ENST00000557487 SOBPA7XYQ1 873 aa16.21■□□□□ 0.19
SHMT2-232ENST00000557487 SEC24DO94855 1032 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-232ENST00000557487 THP07101 528 aa16.21■□□□□ 0.19
SHMT2-232ENST00000557487 MBL2P11226 248 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-232ENST00000557487 RABGGTBP53611 331 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms