RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 OR4K2Q8NGD2 314 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 CDKN2AIPNLQ96HQ2 116 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 ZNF597Q96LX8 424 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 ACOX2Q99424 681 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 FBXO44Q9H4M3 255 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 LIN28AQ9H9Z2 209 aaKnown RBP17.66■□□□□ 0.42
XRCC3-218ENST00000557439 CMTM6Q9NX76 183 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 PCDHB5Q9Y5E4 795 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 SLC4A7Q9Y6M7 1214 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 V9GYQ6 96 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 NPEPPSL1A6NEC2 478 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 OR1I1O60431 355 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 NCK1P16333 377 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 SLC6A4P31645 630 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 CASP2P42575 452 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 SCNN1BP51168 640 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 TRIP4Q15650 581 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-218ENST00000557439 FUT11Q495W5 492 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 RABL3Q5HYI8 236 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 ZBTB49Q6ZSB9 765 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 GABPB2Q8TAK5 448 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-218ENST00000557439 DNAJB14Q8TBM8 379 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 RMDN1Q96DB5 314 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 HBEGFQ99075 208 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 AARSD1Q9BTE6 412 aaKnown RBP17.65■□□□□ 0.42
XRCC3-218ENST00000557439 C1orf50Q9BV19 199 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 BPIFA1Q9NP55 256 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 SLAMF8Q9P0V8 285 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 TSPAN3O60637 253 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 CLIC3O95833 236 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 ELNP15502 786 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 STC1P52823 247 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 RPS24P62847 133 aaKnown RBP17.65■□□□□ 0.42
XRCC3-218ENST00000557439 PRKCQQ04759 706 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 HABP4Q5JVS0 413 aaKnown RBP17.65■□□□□ 0.42
XRCC3-218ENST00000557439 MRNIPQ6NTE8 343 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 GPR21Q99679 349 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 TRMOQ9BU70 441 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 DUS2Q9NX74 493 aaKnown RBP17.65■□□□□ 0.42
XRCC3-218ENST00000557439 RNF112Q9ULX5 631 aa17.65■□□□□ 0.42
XRCC3-218ENST00000557439 ZFC3H1O60293 1989 aaKnown RBP17.64■□□□□ 0.42
XRCC3-218ENST00000557439 TANC1Q9C0D5 1861 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 HTRA2O43464 458 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-218ENST00000557439 PRAMEF11O60813 436 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 ECI2O75521 394 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 PLOD1Q02809 727 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-218ENST00000557439 CLCQ05315 142 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 DSC1Q08554 894 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 MDGA1Q8NFP4 955 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 OR2T34Q8NGX1 318 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 OR2T3Q8NH03 318 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 C8orf48Q96LL4 319 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 ANGPT2O15123 496 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 BAIAP3O94812 1187 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 BMP1P13497 986 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 NFKB2Q00653 900 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 TRAP1Q12931 704 aaKnown RBP17.64■□□□□ 0.41
XRCC3-218ENST00000557439 RPS6KA2Q15349 733 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 TBCELQ5QJ74 424 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 RNF19BQ6ZMZ0 732 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 MIER2Q8N344 545 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 BRSK1Q8TDC3 778 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 PBXIP1Q96AQ6 731 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 CDK15Q96Q40 435 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 GPATCH1Q9BRR8 931 aaKnown RBP17.64■□□□□ 0.41
XRCC3-218ENST00000557439 ZNF225Q9UK10 706 aa17.64■□□□□ 0.41
XRCC3-218ENST00000557439 NIPSNAP2O75323 286 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 VNN2O95498 520 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 TACR2P21452 398 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 SLC6A2P23975 617 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 CALRP27797 417 aaKnown RBP17.63■□□□□ 0.41
XRCC3-218ENST00000557439 ACVR1Q04771 509 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 DUSP4Q13115 394 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 NFE2Q16621 373 aaPredicted RBP17.63■□□□□ 0.41
XRCC3-218ENST00000557439 TRIM71Q2Q1W2 868 aaKnown RBP17.63■□□□□ 0.41
XRCC3-218ENST00000557439 KANK2Q63ZY3 851 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 CARM1Q86X55 608 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 EPHX4Q8IUS5 362 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 PIANPQ8IYJ0 282 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 FBXO39Q8N4B4 442 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 CBR4Q8N4T8 237 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 TSPAN14Q8NG11 270 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 TMEM74Q96NL1 305 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 CCT7Q99832 543 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 EPB41L1Q9H4G0 881 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 PCDHGC4Q9Y5F7 938 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 PLXNA3P51805 1871 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 DRGXA6NNA5 263 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 SEPT4O43236 478 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 TLR5O60602 858 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 CRCPO75575 148 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 SEC24DO94855 1032 aaPredicted RBP17.63■□□□□ 0.41
XRCC3-218ENST00000557439 FGF1P05230 155 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 SERPINF2P08697 491 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 HOXD9P28356 352 aaPredicted RBP17.63■□□□□ 0.41
XRCC3-218ENST00000557439 HSPA13P48723 471 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 ACADVLP49748 655 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 SGSHP51688 502 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 DYNC1I2Q13409 638 aaKnown RBP17.63■□□□□ 0.41
XRCC3-218ENST00000557439 KRT80Q6KB66 452 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms