RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PYROXD2Q8N2H3 581 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 GALNT15Q8N3T1 639 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 PNPLA1Q8N8W4 532 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 RCBTB1Q8NDN9 531 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 OR2AP1Q8NGE2 309 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 FNIP1Q8TF40 1166 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 MRPL47Q9HD33 250 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 TAS2R14Q9NYV8 317 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 BTBD3Q9Y2F9 522 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 HS3ST3A1Q9Y663 406 aa9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 BZW2Q9Y6E2 419 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-228ENST00000557033 TMCO5BA8MYB1 307 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 RNF103O00237 685 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 SLC31A1O15431 190 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 RNF8O76064 485 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 LDOC1O95751 146 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 C1SP09871 688 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 MYBL1P10243 752 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 PTMSP20962 102 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 PSMA2P25787 234 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 EPHA8P29322 1005 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 AKT2P31751 481 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ZNF135P52742 658 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 NDST2P52849 883 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 IL9RQ01113 521 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 OGDHQ02218 1023 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 KCNAB2Q13303 367 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ACAP1Q15027 740 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ZNF805Q5CZA5 627 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ERMARDQ5T6L9 678 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 CCNI2Q6ZMN8 369 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ZNF571Q7Z3V5 609 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 RYBPQ8N488 228 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ASB12Q8WXK4 309 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 SYN2Q92777 582 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ARHGEF26Q96DR7 871 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 IQCDQ96DY2 449 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 TRIM11Q96F44 468 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 SLC17A9Q9BYT1 436 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 TTYH3Q9C0H2 523 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ISCUQ9H1K1 167 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 IPPKQ9H8X2 491 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 KLHL11Q9NVR0 708 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 FTSJ1Q9UET6 329 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 MFHAS1Q9Y4C4 1052 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 PCDHGA1Q9Y5H4 931 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 FADS3Q9Y5Q0 445 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 ACTL7AQ9Y615 435 aa9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 TP53BP1Q12888 1972 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 COL5A1P20908 1838 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-228ENST00000557033 A0A1W2PQJ5 194 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 SYCE3A1L190 88 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 C16orf96A6NNT2 1141 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 RASA4BC9J798 803 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 KRIT1O00522 736 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 DDX3XO00571 662 aaKnown RBP eCLIP9.92□□□□□ -0.821e-57■■□□□ 12.4
HNRNPC-228ENST00000557033 RASA4O43374 803 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 H2AFYO75367 372 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 PAK4O96013 591 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 THEGLP0DJG4 465 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 HCAR3P49019 387 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 SUOXP51687 545 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 UBASH3AP57075 661 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 TPI1P60174 286 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 SRSF11Q05519 484 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 BNIP3Q12983 259 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 SGCGQ13326 291 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 RNFT1Q5M7Z0 435 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 FDX2Q6P4F2 183 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 GDPD4Q6W3E5 623 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 ABI3BPQ7Z7G0 1075 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 ZNF354CQ86Y25 554 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 GATAD2AQ86YP4 633 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 EID2Q8N6I1 236 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 HCAR2Q8TDS4 363 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 KLK6Q92876 244 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 CNDP2Q96KP4 475 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 GDAP1L1Q96MZ0 367 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 LENG8Q96PV6 779 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 CPEB1Q9BZB8 566 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 TM6SF2Q9BZW4 377 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 ZDHHC6Q9H6R6 413 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 LRRC19Q9H756 370 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 GPATCH2Q9NW75 528 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 CNOT8Q9UFF9 292 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 ZFR2Q9UPR6 939 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 SCINQ9Y6U3 715 aa9.92□□□□□ -0.82
HNRNPC-228ENST00000557033 ACACBO00763 2458 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 DOCK9Q9BZ29 2069 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 GOLGA6L19H0YKK7 550 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 PRPSAP2O60256 369 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 KRT37O76014 449 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 TMCC1O94876 653 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 IGSF6O95976 241 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 SKILP12757 684 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 IFNGR1P15260 489 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 PRLRP16471 622 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 CD53P19397 219 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 GRK2P25098 689 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 PCK1P35558 622 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms