RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 PRAMEF1O95521 474 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 ITGALP20701 1170 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 IVDP26440 423 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 MGAT1P26572 445 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 TRIM23P36406 574 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 ARRB1P49407 418 aaPredicted RBP17.42■□□□□ 0.38
PSEN1-218ENST00000556864 ITGA8P53708 1063 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 CDK3Q00526 305 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 GLE1Q53GS7 698 aaKnown RBP17.42■□□□□ 0.38
PSEN1-218ENST00000556864 TSTD2Q5T7W7 516 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 HIBCHQ6NVY1 386 aaPredicted RBP17.42■□□□□ 0.38
PSEN1-218ENST00000556864 FUBP1Q96AE4 644 aaKnown RBP17.42■□□□□ 0.38
PSEN1-218ENST00000556864 DNAJC1Q96KC8 554 aaKnown RBP17.42■□□□□ 0.38
PSEN1-218ENST00000556864 WDR92Q96MX6 357 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 GTPBP2Q9BX10 602 aaKnown RBP17.42■□□□□ 0.38
PSEN1-218ENST00000556864 CARD6Q9BX69 1037 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 DPH5Q9H2P9 285 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 L2HGDHQ9H9P8 463 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 MRM3Q9HC36 420 aaKnown RBP17.42■□□□□ 0.38
PSEN1-218ENST00000556864 NLE1Q9NVX2 485 aaPredicted RBP17.42■□□□□ 0.38
PSEN1-218ENST00000556864 SYBUQ9NX95 663 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 WHRNQ9P202 907 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 FKBPLQ9UIM3 349 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 SNX24Q9Y343 169 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 SNX11Q9Y5W9 270 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 ABCA7Q8IZY2 2146 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 LRRK1Q38SD2 2015 aa17.42■□□□□ 0.38
PSEN1-218ENST00000556864 ZNF106Q9H2Y7 1883 aaKnown RBP17.41■□□□□ 0.38
PSEN1-218ENST00000556864 PCDH15Q96QU1 1955 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 SPTY2D1-AS1A0A0U1RR47 76 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 H3BM21 787 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 SOD1P00441 154 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 RPL21P46778 160 aaKnown RBP17.41■□□□□ 0.38
PSEN1-218ENST00000556864 CCT8P50990 548 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 IRX4P78413 519 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 CAV1Q03135 178 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 ZNF423Q2M1K9 1284 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 CCDC38Q502W7 563 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 DUPD1Q68J44 220 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 CASC4Q6P4E1 433 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 FAM151BQ6UXP7 276 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 CAND1Q86VP6 1230 aaKnown RBP17.41■□□□□ 0.38
PSEN1-218ENST00000556864 PDIK1LQ8N165 341 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 SLC22A18ASQ8N1D0 253 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 DCLK2Q8N568 766 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 OR13C4Q8NGS5 318 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 ULK4Q96C45 1275 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 HIC2Q96JB3 615 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 VPS35Q96QK1 796 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 ZCCHC2Q9C0B9 1178 aaKnown RBP17.41■□□□□ 0.38
PSEN1-218ENST00000556864 IL26Q9NPH9 171 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 FSCN3Q9NQT6 498 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 SMOXQ9NWM0 555 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 KLQ9UEF7 1012 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 KCTD3Q9Y597 815 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 SLC30A1Q9Y6M5 507 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 TRPM6Q9BX84 2022 aa17.41■□□□□ 0.38
PSEN1-218ENST00000556864 SDR42E2A6NKP2 422 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 FADS2P1A8MWK0 482 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 H7C0S8 307 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 INPP4BO15327 924 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 MAGEA3P43357 314 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 ARL4CP56559 192 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 MRPS25P82663 173 aaKnown RBP17.4■□□□□ 0.38
PSEN1-218ENST00000556864 TMPRSS15P98073 1019 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 BNC1Q01954 994 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 FZD2Q14332 565 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 HIF1AQ16665 826 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 AFTPHQ6ULP2 937 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 KDM7AQ6ZMT4 941 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 SPATS2Q86XZ4 545 aaKnown RBP17.4■□□□□ 0.38
PSEN1-218ENST00000556864 PELI3Q8N2H9 469 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 MINDY1Q8N5J2 469 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 NOA1Q8NC60 698 aaKnown RBP17.4■□□□□ 0.38
PSEN1-218ENST00000556864 OR56A4Q8NGH8 313 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 GLYATL1Q969I3 302 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.4■□□□□ 0.38
PSEN1-218ENST00000556864 AGAP2Q99490 1192 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 ELF4Q99607 663 aaPredicted RBP17.4■□□□□ 0.38
PSEN1-218ENST00000556864 SOX13Q9UN79 622 aa17.4■□□□□ 0.38
PSEN1-218ENST00000556864 MYLKQ15746 1914 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 MAGEB16A2A368 324 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 CCDC78A2IDD5 438 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 TNFRSF10CO14798 259 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 SRP72O76094 671 aaKnown RBP17.39■□□□□ 0.37
PSEN1-218ENST00000556864 RASGRP1O95267 797 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 PAMP19021 973 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 PSMA3P25788 255 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 MC4RP32245 332 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 BLKP51451 505 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 PRAMEP78395 509 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 CRADDP78560 199 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 ACVR1Q04771 509 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 CHRNA6Q15825 494 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 HLA-BQ31612 363 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 ENPP7Q6UWV6 458 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 BTN2A2Q8WVV5 523 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 STAMBPL1Q96FJ0 436 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 COX14Q96I36 57 aa17.39■□□□□ 0.37
PSEN1-218ENST00000556864 NAT9Q9BTE0 207 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms