RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 SIX4Q9UIU6 781 aa4.16□□□□□ -1.74
FCF1-208ENST00000556814 TINAGQ9UJW2 476 aa4.16□□□□□ -1.74
FCF1-208ENST00000556814 SESN1Q9Y6P5 492 aa4.16□□□□□ -1.74
FCF1-208ENST00000556814 ANKRD18BA2A2Z9 1011 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 DENND3A2RUS2 1198 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 C4orf47A7E2U8 309 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 IKBKBO14920 756 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 SPINT2O43291 252 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 GFPT2O94808 682 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 CLDN14O95500 239 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 EGFP01133 1207 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 ACTN1P12814 892 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 RARGP13631 454 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 MRPS34P82930 218 aaKnown RBP4.15□□□□□ -1.75
FCF1-208ENST00000556814 DLG1Q12959 904 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 SNTA1Q13424 505 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 SF3B4Q15427 424 aaKnown RBP eCLIP4.15□□□□□ -1.75
FCF1-208ENST00000556814 CDONQ4KMG0 1287 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 ZNF585BQ52M93 769 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 DCST1Q5T197 706 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 RGMBQ6NW40 437 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 DUS1LQ6P1R4 473 aaKnown RBP4.15□□□□□ -1.75
FCF1-208ENST00000556814 FASTKD5Q7L8L6 764 aaKnown RBP4.15□□□□□ -1.75
FCF1-208ENST00000556814 FOXRED2Q8IWF2 684 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 CHERPQ8IWX8 916 aaKnown RBP4.15□□□□□ -1.75
FCF1-208ENST00000556814 RPAP2Q8IXW5 612 aaPredicted RBP4.15□□□□□ -1.75
FCF1-208ENST00000556814 TEX11Q8IYF3 940 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 RND1Q92730 232 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 TANKQ92844 425 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 BICD1Q96G01 975 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 CCDC34Q96HJ3 373 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 PGAM5Q96HS1 289 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 CMTM3Q96MX0 182 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 SIL1Q9H173 461 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 SEPT11Q9NVA2 429 aaKnown RBP4.15□□□□□ -1.75
FCF1-208ENST00000556814 ZNF224Q9NZL3 707 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 ACSL5Q9ULC5 683 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 VDAC3Q9Y277 283 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 RABGAP1Q9Y3P9 1069 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 LOXL2Q9Y4K0 774 aa4.15□□□□□ -1.75
FCF1-208ENST00000556814 KANSL1LA0AUZ9 987 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 MAGEA13PA6NCF6 341 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 AP3D1O14617 1153 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 PTP4A3O75365 173 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 KDM4BO94953 1096 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 ZBTB11O95625 1053 aaPredicted RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 PMS2P2O95744 297 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 CCKBRP32239 447 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 DRG2P55039 364 aaKnown RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 TAS2R40P59535 323 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 ACSM2AQ08AH3 577 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 ZNF155Q12901 538 aaPredicted RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 PRKG2Q13237 762 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 MAD2L1Q13257 205 aaPredicted RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 MEA1Q16626 185 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 PNLIPRP3Q17RR3 467 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 IZUMO4Q1ZYL8 232 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 PAPPA-AS1Q5QFB9 102 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 GKAP1Q5VSY0 366 aaPredicted RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 ACSM2BQ68CK6 577 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 CAPRIN2Q6IMN6 1127 aaKnown RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 RBM23Q86U06 439 aaKnown RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 TICAM2Q86XR7 235 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 TMTC2Q8N394 836 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 KCNH5Q8NCM2 988 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 C1orf131Q8NDD1 294 aaKnown RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 LILRB1Q8NHL6 650 aaPredicted RBP4.14□□□□□ -1.75
FCF1-208ENST00000556814 DNAAF4Q8WXU2 420 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 ORAI1Q96D31 301 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 PPP1R13BQ96KQ4 1090 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 NEUROD6Q96NK8 337 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 CSF3RQ99062 836 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 SDF4Q9BRK5 362 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 MAGIXQ9H6Y5 334 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 C1RLQ9NZP8 487 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 OR14J1Q9UGF5 321 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 FBXW11Q9UKB1 542 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 PCDHGB1Q9Y5G3 927 aa4.14□□□□□ -1.75
FCF1-208ENST00000556814 C1orf226A1L170 272 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 FRMD3A2A2Y4 597 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 EME2A4GXA9 379 aaPredicted RBP4.13□□□□□ -1.75
FCF1-208ENST00000556814 SRRM3A6NNA2 597 aaPredicted RBP4.13□□□□□ -1.75
FCF1-208ENST00000556814 A8MZ25 164 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 M0QZ24 198 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 HS3ST1O14792 307 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 DOK2O60496 412 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 GPC4O75487 556 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 HIST1H2ABP04908 130 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 LINC00271P0C7V0 271 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 PLA2G2AP14555 144 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 HIST1H2ADP20671 130 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 TM4SF1P30408 202 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 HOXA13P31271 388 aaPredicted RBP4.13□□□□□ -1.75
FCF1-208ENST00000556814 PDLIM4P50479 330 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 CLCN3P51790 818 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 GALCP54803 685 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 CDH8P55286 799 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 PDE1BQ01064 536 aa4.13□□□□□ -1.75
FCF1-208ENST00000556814 GRSF1Q12849 480 aaKnown RBP eCLIP4.13□□□□□ -1.75
FCF1-208ENST00000556814 AIMP2Q13155 320 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms