RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SATB1Q01826 763 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SLC6A3Q01959 620 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 OCRLQ01968 901 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 DEUP1Q05D60 604 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ASPHQ12797 758 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 DYNC1I2Q13409 638 aaKnown RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 THOC5Q13769 683 aaKnown RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 BMPR2Q13873 1038 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 FAM110CQ1W6H9 321 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 DCAF4L1Q3SXM0 396 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 PPP6R3Q5H9R7 873 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF484Q5JVG2 852 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 EFHC1Q5JVL4 640 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 TXNRD3NBQ6F5E7 133 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 FSTL4Q6MZW2 842 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 GADL1Q6ZQY3 521 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 CATSPERGQ6ZRH7 1159 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 RINLQ6ZS11 566 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 FAM183BPQ6ZVS7 135 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 PDZD4Q76G19 769 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 MARK2Q7KZI7 788 aaKnown RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 PLPPR4Q7Z2D5 763 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 FGD2Q7Z6J4 655 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SDCCAG8Q86SQ7 713 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SETD3Q86TU7 594 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 PHYKPLQ8IUZ5 450 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 MFN1Q8IWA4 741 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 HACE1Q8IYU2 909 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 KIRREL3Q8IZU9 778 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 NDUFAF2Q8N183 169 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 NME8Q8N427 588 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 LRRC71Q8N4P6 559 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 AFAP1L2Q8N4X5 818 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ANKRD53Q8N9V6 530 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 MCUQ8NE86 351 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 MDGA1Q8NFP4 955 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 CMASQ8NFW8 434 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 FAM172AQ8WUF8 416 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 TFB1MQ8WVM0 346 aaKnown RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 RXFP2Q8WXD0 754 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 TFAP2BQ92481 460 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 USP6NLQ92738 828 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 BADQ92934 168 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 RTP4Q96DX8 246 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 CMTM5Q96DZ9 223 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 HPDLQ96IR7 371 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF560Q96MR9 790 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SPATA33Q96N06 139 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 QKIQ96PU8 341 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 RNF157Q96PX1 679 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 NR1H4Q96RI1 486 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 CPXM1Q96SM3 734 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SERPINI1Q99574 410 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF184Q99676 751 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 THTPAQ9BU02 230 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SLC13A1Q9BZW2 595 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 NMUR2Q9GZQ4 415 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 POPDC2Q9HBU9 364 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 VCX3AQ9NNX9 186 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 IL23AQ9NPF7 189 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 FBXO6Q9NRD1 293 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ARL8BQ9NVJ2 186 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 THAP1Q9NVV9 213 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ERAP1Q9NZ08 941 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 DLGAP2Q9P1A6 1054 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 STX18Q9P2W9 335 aaKnown RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 MORF4L1Q9UBU8 362 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 B4GALT6Q9UBX8 382 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 NKX1-2Q9UD57 310 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 DNAJB4Q9UDY4 337 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 TSPAN16Q9UKR8 245 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 BARX2Q9UMQ3 279 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 TNFSF13BQ9Y275 285 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 HBS1LQ9Y450 684 aaKnown RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 LRRC42Q9Y546 428 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 DMRT1Q9Y5R6 373 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 TEX264Q9Y6I9 313 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 CHD9Q3L8U1 2897 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 USP34Q70CQ2 3546 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SMCHD1A6NHR9 2005 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 COL1A2P08123 1366 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 A0A0A6YYJ9 748 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 FAM237BA0A1B0GVD1 139 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 TCRBV7S3A2A0A539 114 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 C2CD4BA6NLJ0 364 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 AP3B1O00203 1094 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 NRP1O14786 923 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 OPHN1O60890 802 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SKAP2O75563 359 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 STAMBPO95630 424 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 HSPA4LO95757 839 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SERPINE1P05121 402 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 APOA4P06727 396 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 FESP07332 822 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 BPGMP07738 259 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CD48P09326 243 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 DLDP09622 509 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 DHRS4L1P0CG22 281 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 STAG3L1P0CL83 205 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 KITP10721 976 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms