RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 NTN3O00634 580 aaPredicted RBP5.01□□□□□ -1.61
PRPF39-209ENST00000556353 MID1O15344 667 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 PLRG1O43660 514 aaKnown RBP5.01□□□□□ -1.61
PRPF39-209ENST00000556353 NBNO60934 754 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 TCEA3O75764 348 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 CGAP01215 116 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 ATP1A1P05023 1023 aaKnown RBP5.01□□□□□ -1.61
PRPF39-209ENST00000556353 CETPP11597 493 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 GPD2P43304 727 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 RBM39Q14498 530 aaKnown RBP5.01□□□□□ -1.61
PRPF39-209ENST00000556353 VEPH1Q14D04 833 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 TAF11Q15544 211 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 ZNF667Q5HYK9 610 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 LRRC8EQ6NSJ5 796 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 SATL1Q86VE3 508 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 IL17RCQ8NAC3 791 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 AGBL3Q8NEM8 1001 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 SPATA22Q8NHS9 363 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 FBXL8Q96CD0 374 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 ZNF570Q96NI8 536 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 LRRC4Q9HBW1 653 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 CNGB3Q9NQW8 809 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 KIAA1456Q9P272 454 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.01□□□□□ -1.61
PRPF39-209ENST00000556353 COMMD10Q9Y6G5 202 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 TUBGCP6Q96RT7 1819 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 SLIT3O75094 1523 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 ARHGEF10O15013 1369 aa5.01□□□□□ -1.61
PRPF39-209ENST00000556353 GREB1LQ9C091 1923 aaPredicted RBP5□□□□□ -1.61
PRPF39-209ENST00000556353 ZNF587BE7ETH6 402 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 LDHAP00338 332 aaKnown RBP5□□□□□ -1.61
PRPF39-209ENST00000556353 ETFAP13804 333 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 POU1F1P28069 291 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 IL15P40933 162 aaPredicted RBP5□□□□□ -1.61
PRPF39-209ENST00000556353 FUT6P51993 359 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 DMP1Q13316 513 aaPredicted RBP5□□□□□ -1.61
PRPF39-209ENST00000556353 MMEL1Q495T6 779 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 MAP3K21Q5TCX8 1036 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 DEFB132Q7Z7B7 95 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 TADA2BQ86TJ2 420 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 DSELQ8IZU8 1212 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 TRIM63Q969Q1 353 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 RPS6KC1Q96S38 1066 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 PHF7Q9BWX1 381 aaPredicted RBP5□□□□□ -1.61
PRPF39-209ENST00000556353 PTPRHQ9HD43 1115 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 C1RLQ9NZP8 487 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 CTNNAL1Q9UBT7 734 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 ADAM18Q9Y3Q7 739 aa5□□□□□ -1.61
PRPF39-209ENST00000556353 POLR3AO14802 1390 aaPredicted RBP5□□□□□ -1.61
PRPF39-209ENST00000556353 NFAT5O94916 1531 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 P2RY10O00398 339 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 FGF17O60258 216 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 EDN2P20800 178 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 BIRC2Q13490 618 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 ATG16L1Q676U5 607 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 FBXL22Q6P050 247 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 NOXA1Q86UR1 476 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 TMTC1Q8IUR5 882 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 NKAPQ8N5F7 415 aaKnown RBP4.99□□□□□ -1.61
PRPF39-209ENST00000556353 KBTBD3Q8NAB2 608 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 MAGEC3Q8TD91 643 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 LRRC8CQ8TDW0 803 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 USP13Q92995 863 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-209ENST00000556353 TTC14Q96N46 770 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 PGLYRP2Q96PD5 576 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 HAUS8Q9BT25 410 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 RCOR1Q9UKL0 485 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 PSAT1Q9Y617 370 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 KIAA0232Q92628 1395 aa4.99□□□□□ -1.61
PRPF39-209ENST00000556353 COL5A2P05997 1499 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-209ENST00000556353 DISP2A7MBM2 1401 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 SSH2Q76I76 1423 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 BTAF1O14981 1849 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 PCNTO95613 3336 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 GOLGA6L10A0A0M3HER8 536 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 TEX22C9J3V5 150 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 C16orf97H3BN30 126 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 BCAT2O15382 392 aaPredicted RBP4.98□□□□□ -1.61
PRPF39-209ENST00000556353 MMP2P08253 660 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 GLIPR1P48060 266 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 CLCN3P51790 818 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 EFNB1P98172 346 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 CTF1Q16619 201 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 CEP85LQ5SZL2 805 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 IRAK1BP1Q5VVH5 260 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 ADAM5Q6NVV9 412 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 C11orf65Q8NCR3 313 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 BEST2Q8NFU1 509 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 OR13A1Q8NGR1 328 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 TMEM255BQ8WV15 326 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 RND1Q92730 232 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 WBP2Q969T9 261 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 ELP4Q96EB1 424 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 BBS4Q96RK4 519 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 POLR3GLQ9BT43 218 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 ISCA1Q9BUE6 129 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 PCDH9Q9HC56 1237 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 DDX4Q9NQI0 724 aaKnown RBP4.98□□□□□ -1.61
PRPF39-209ENST00000556353 ZFP57Q9NU63 452 aa4.98□□□□□ -1.61
PRPF39-209ENST00000556353 MCM9Q9NXL9 1143 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms