RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CD48P09326 243 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CCDC172P0C7W6 258 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SKILP12757 684 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GPR1P46091 355 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ARSEP51690 589 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CDH6P55285 790 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 POLE2P56282 527 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GPLD1P80108 840 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MMRN1Q13201 1228 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 STX1AQ16623 288 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MARC1Q5VT66 337 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 HGSNATQ68CP4 663 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 PPP1R2P3Q6NXS1 205 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 BORAQ6PGQ7 559 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TMCO3Q6UWJ1 677 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CLEC18BQ6UXF7 455 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MARK2Q7KZI7 788 aaKnown RBP14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ZNF765Q7L2R6 523 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 PTRH1Q86Y79 214 aaKnown RBP14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CPNE8Q86YQ8 564 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 AOPEPQ8N6M6 819 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 PAF1Q8N7H5 531 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CLEC18CQ8NCF0 446 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ZNF564Q8TBZ8 553 aaPredicted RBP14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 HSPH1Q92598 858 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 AP2M1Q96CW1 435 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SLC45A3Q96JT2 553 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 BTBD6Q96KE9 485 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 EPN3Q9H201 632 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 APMAPQ9HDC9 416 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NT5MQ9NPB1 228 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SLC39A1Q9NY26 324 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TBC1D29Q9UFV1 150 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 PRKAB1Q9Y478 270 aa14.26□□□□□ -0.13
CHMP4BP1-201ENST00000556017 LOC101059948A0A1B0GTJ6 334 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GOLGA6CA6NDK9 693 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GOLGA6BA6NDN3 693 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NKX2-8O15522 239 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 RAD1O60671 282 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MAP3K6O95382 1288 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GOLGA6DP0CG33 693 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CDK11BP21127 795 aaKnown RBP14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CSTF2P33240 577 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MC2RQ01718 297 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 KCNAB2Q13303 367 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SKIDA1Q1XH10 827 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 BOLA3Q53S33 107 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 USP45Q70EL2 814 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CACNA2D3Q8IZS8 1091 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ATPAF2Q8N5M1 289 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 IL22RA1Q8N6P7 574 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NIPA2Q8N8Q9 360 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ANKRD20A12PQ8NF67 263 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ARRDC2Q8TBH0 407 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TEKT4Q8WW24 435 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MAML1Q92585 1016 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 EID2BQ96D98 161 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NAP1L5Q96NT1 182 aaPredicted RBP14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CTRCQ99895 268 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 RIOK2Q9BVS4 552 aaKnown RBP14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GOLGA6AQ9NYA3 693 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 AKAP7Q9P0M2 348 aaPredicted RBP14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MYO1AQ9UBC5 1043 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TEX15Q9BXT5 2789 aa14.25□□□□□ -0.13
CHMP4BP1-201ENST00000556017 FADS2P1A8MWK0 482 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MFSD11O43934 449 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CLDN7O95471 211 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ATP1A1P05023 1023 aaKnown RBP14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 DESP17661 470 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 OAS2P29728 719 aaKnown RBP14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ARL4AP40617 200 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ATP1A2P50993 1020 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 DSC2Q02487 901 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NIPAL4Q0D2K0 466 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ASIC2Q16515 512 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ATP13A4Q4VNC1 1196 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 FAM182AQ5T1J6 154 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 HENMT1Q5T8I9 393 aaKnown RBP14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 WDR74Q6RFH5 385 aaPredicted RBP14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 UNC5BQ8IZJ1 945 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 LRRN4Q8WUT4 740 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 LYSMD1Q96S90 227 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 DPYSL5Q9BPU6 564 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TDRD1Q9BXT4 1180 aaKnown RBP14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ASPSCR1Q9BZE9 553 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SIDT1Q9NXL6 827 aaKnown RBP14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TUBD1Q9UJT1 453 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TMEM184BQ9Y519 407 aaPredicted RBP14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SCINQ9Y6U3 715 aa14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SPTAN1Q13813 2472 aaKnown RBP14.24□□□□□ -0.13
CHMP4BP1-201ENST00000556017 PRR19A6NJB7 356 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 INPP4BO15327 924 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 DLGAP3O95886 979 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MMP2P08253 660 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ZNF30P17039 623 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 F8A1P23610 371 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GARSP41250 739 aaKnown RBP14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GALNT2Q10471 571 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 LRP8Q14114 963 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 DCAF12Q5T6F0 453 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms