RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	MMP12	P39900	470 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	HADHA	P40939	763 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	ARCN1	P48444	511 aa	Known RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZNF140	P52738	457 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	STC1	P52823	247 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	METAP1	P53582	386 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	ATXN3	P54252	364 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	GPX6	P59796	221 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	FAM193A	P78312	1265 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	CRADD	P78560	199 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	RALGDS	Q12967	914 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	AGER	Q15109	404 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	TTC31	Q49AM3	519 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	AGBL4	Q5VU57	503 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZDHHC20	Q5W0Z9	365 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	LYSMD4	Q5XG99	296 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	DENND2C	Q68D51	928 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	CASC4	Q6P4E1	433 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	FBXO38	Q6PIJ6	1188 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	SYT12	Q8IV01	421 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	ANKMY2	Q8IV38	441 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	IQCK	Q8N0W5	287 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	CDKN2AIPNL	Q96HQ2	116 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	FCRL3	Q96P31	734 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	SMIM14	Q96QK8	99 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	GPR63	Q9BZJ6	419 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	CDH19	Q9H159	772 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	CD93	Q9NPY3	652 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	RAD18	Q9NS91	495 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	TMEM74B	Q9NUR3	256 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	FBXL12	Q9NXK8	326 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	KCTD5	Q9NXV2	234 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	USP36	Q9P275	1121 aa	Known RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	CHMP2B	Q9UQN3	213 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	NCKAP1	Q9Y2A7	1128 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	FADS3	Q9Y5Q0	445 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	RPS6KL1	Q9Y6S9	549 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	C1orf232	A0A0U1RR37	186 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	TAF4	O00268	1085 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	STX7	O15400	261 aa	Known RBP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	PLRG1	O43660	514 aa	Known RBP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	NDUFS2	O75306	463 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	CLDN7	O95471	211 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	PIRT	P0C851	137 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	ACADM	P11310	421 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	PAM	P19021	973 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	LHCGR	P22888	699 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	ITPKA	P23677	461 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	NMBR	P28336	390 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	OXTR	P30559	389 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	PHB	P35232	272 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	DPP6	P42658	865 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	TAS2R38	P59533	333 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	MTM1	Q13496	603 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	ARHGEF7	Q14155	803 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	SLC29A2	Q14542	456 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	CRYM	Q14894	314 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	NUMA1	Q14980	2115 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	PTPRR	Q15256	657 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	UAP1	Q16222	522 aa	Predicted RBP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	CNGA3	Q16281	694 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	ESRP1	Q6NXG1	681 aa	Known RBP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	LIPI	Q6XZB0	460 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	LYSMD3	Q7Z3D4	306 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	GLT6D1	Q7Z4J2	308 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	TECPR1	Q7Z6L1	1165 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	NRSN1	Q8IZ57	195 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	OR13J1	Q8NGT2	312 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	GSDMB	Q8TAX9	411 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	SCG3	Q8WXD2	468 aa	Known RBP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	ASB12	Q8WXK4	309 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	MFSD3	Q96ES6	412 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZNF778	Q96MU6	729 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	OMD	Q99983	421 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	SGK2	Q9HBY8	427 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	FETUB	Q9UGM5	382 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	PILRB	Q9UKJ0	227 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	MSRB2	Q9Y3D2	182 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	NEUROG3	Q9Y4Z2	214 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	KCTD3	Q9Y597	815 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	ARL5A	Q9Y689	179 aa		11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	FASN	P49327	2511 aa	Known RBP	11.28	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZZEF1	O43149	2961 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907		A0A087WUV0	522 aa	Predicted RBP	11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907		A0A1W2PP55	124 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	TCEA3	O75764	348 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	RNASEH2A	O75792	299 aa	Known RBP	11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	C1QA	P02745	245 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	PRKCG	P05129	697 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	NUDT17	P0C025	328 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	SSTR1	P30872	391 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	SPINT3	P49223	89 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	TPMT	P51580	245 aa		11.27	□□□□□ -0.61
RAD51B-222	ENST00000555907	DCDC1	P59894	354 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms