RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 KRT7P08729 469 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 MX2P20592 715 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 CD1CP29017 333 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 ALDH4A1P30038 563 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 MAPK10P53779 464 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 TRA2AQ13595 282 aaKnown RBP eCLIP19.62■□□□□ 0.73
PRKCH-219ENST00000555906 IHHQ14623 411 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 PYCR3Q53H96 274 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 TRIM74Q86UV6 250 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 CPNE8Q86YQ8 564 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 GALNT13Q8IUC8 556 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 MAP7D3Q8IWC1 876 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 KCTD6Q8NC69 237 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 ARRDC2Q8TBH0 407 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 USP7Q93009 1102 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 HDAC11Q96DB2 347 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 SGF29Q96ES7 293 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 RBM22Q9NW64 420 aaKnown RBP eCLIP19.62■□□□□ 0.73
PRKCH-219ENST00000555906 WDR70Q9NW82 654 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 CTTNBP2NLQ9P2B4 639 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 CHKBQ9Y259 395 aa19.62■□□□□ 0.73
PRKCH-219ENST00000555906 FLNBO75369 2602 aaKnown RBP19.62■□□□□ 0.73
PRKCH-219ENST00000555906 IGHV5-10-1A0A0J9YXX1 117 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 GOLGA6L19H0YKK7 550 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 HNRNPH3P31942 346 aaKnown RBP19.61■□□□□ 0.73
PRKCH-219ENST00000555906 MAN1A1P33908 653 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 FASLGP48023 281 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 LIMK2P53671 638 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 TAS2R40P59535 323 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 SRSF6Q13247 344 aaKnown RBP19.61■□□□□ 0.73
PRKCH-219ENST00000555906 SQSTM1Q13501 440 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 ATP13A4Q4VNC1 1196 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 MANEAQ5SRI9 462 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 TMEM164Q5U3C3 297 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 DTX1Q86Y01 620 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 OR4D9Q8NGE8 314 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 EXD1Q8NHP7 514 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 CTNNBL1Q8WYA6 563 aaPredicted RBP19.61■□□□□ 0.73
PRKCH-219ENST00000555906 CCDC74BQ96LY2 380 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 DPYSL5Q9BPU6 564 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 VPS18Q9P253 973 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 TMEM98Q9Y2Y6 226 aa19.61■□□□□ 0.73
PRKCH-219ENST00000555906 IGHV1OR21-1A0A087WYE8 117 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 AGRPO00253 132 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 PRLP01236 227 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 ITGB2P05107 769 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 H2AFZP0C0S5 128 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 THRAP10827 490 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 CSF2RBP32927 897 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 GPLD1P80108 840 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 GBE1Q04446 702 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 ZNF574Q6ZN55 896 aaPredicted RBP19.6■□□□□ 0.73
PRKCH-219ENST00000555906 USP53Q70EK8 1073 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 H2AFVQ71UI9 128 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 ZFAND4Q86XD8 727 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.6■□□□□ 0.73
PRKCH-219ENST00000555906 PQLC3Q8N755 202 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 RCBTB1Q8NDN9 531 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 LPCAT1Q8NF37 534 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 AGAP2Q99490 1192 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 RIOK2Q9BVS4 552 aaKnown RBP19.6■□□□□ 0.73
PRKCH-219ENST00000555906 PCDH9Q9HC56 1237 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 IFNKQ9P0W0 207 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 PLEKHM1Q9Y4G2 1056 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 PCDHB11Q9Y5F2 797 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 TLN1Q9Y490 2541 aaKnown RBP19.6■□□□□ 0.73
PRKCH-219ENST00000555906 SPTA1P02549 2419 aa19.6■□□□□ 0.73
PRKCH-219ENST00000555906 B8ZZF3 427 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 J3QKU1 62 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 PPM1DO15297 605 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 CASP14P31944 242 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 NIPAL4Q0D2K0 466 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 SLC18A3Q16572 532 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 HENMT1Q5T8I9 393 aaKnown RBP19.59■□□□□ 0.73
PRKCH-219ENST00000555906 MARK2Q7KZI7 788 aaKnown RBP19.59■□□□□ 0.73
PRKCH-219ENST00000555906 CCDC13Q8IYE1 715 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 SFRP1Q8N474 314 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 ZNF830Q96NB3 372 aaPredicted RBP19.59■□□□□ 0.73
PRKCH-219ENST00000555906 KCNK4Q9NYG8 393 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 DTLQ9NZJ0 730 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 PCDHGA4Q9Y5G9 962 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 PCDHGA3Q9Y5H0 932 aa19.59■□□□□ 0.73
PRKCH-219ENST00000555906 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.59■□□□□ 0.73
PRKCH-219ENST00000555906 C1orf232A0A0U1RR37 186 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 ZNF487B1APH4 448 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 STMND1H3BQB6 276 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 INPP4BO15327 924 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 CLDN7O95471 211 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 CCL4P13236 92 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 XKR5Q6UX68 686 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 VASH2Q86V25 355 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 CCDC112Q8NEF3 446 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 SLC37A2Q8TED4 501 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 PACSIN1Q9BY11 444 aa19.58■□□□□ 0.72
PRKCH-219ENST00000555906 RGSL1A5PLK6 1076 aa19.57■□□□□ 0.72
PRKCH-219ENST00000555906 DNAJC6O75061 913 aa19.57■□□□□ 0.72
PRKCH-219ENST00000555906 TPM3P06753 285 aa19.57■□□□□ 0.72
PRKCH-219ENST00000555906 MMP2P08253 660 aa19.57■□□□□ 0.72
PRKCH-219ENST00000555906 SPINT3P49223 89 aa19.57■□□□□ 0.72
PRKCH-219ENST00000555906 IFI35P80217 286 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms