RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 AQP12BA6NM10 295 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SYCE1LA8MT33 242 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SUPT3HB4E1H0 165 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 UBXN8O00124 270 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 GIPC1O14908 333 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 PIP5K1BO14986 540 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 PFDN6O15212 129 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CA12O43570 354 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MGEA5O60502 916 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SUPT3HO75486 399 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TIPRLO75663 272 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CNTN5O94779 1100 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 RHOBTB1O94844 696 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CDK14O94921 469 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 EPOP01588 193 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ASLP04424 464 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SERPINF2P08697 491 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ALDOCP09972 364 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 OR4Q2P0C623 313 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ATXN1LP0C7T5 689 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 FCGR1AP12314 374 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 BMP2P12643 396 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ARSAP15289 507 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ZNF37AP17032 561 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 LBPP18428 481 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 OR1E1P30953 314 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MAPKAPK2P49137 400 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 RPS6KA3P51812 740 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CDH13P55290 713 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 NME5P56597 212 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 YBEYP58557 167 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 ATP6V0D1P61421 351 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SH3BP2P78314 561 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ACVR1Q04771 509 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 RAD51Q06609 339 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 LCP2Q13094 533 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SERINC3Q13530 473 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 BTG3Q14201 252 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 DSC3Q14574 896 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 DDR2Q16832 855 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MYLK3Q32MK0 819 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 LRRC23Q53EV4 343 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 ALFQ53S48 1182 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 COQ5Q5HYK3 327 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 C10orf120Q5SQS8 335 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ARTNQ5T4W7 220 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 KANK2Q63ZY3 851 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 RAP1GAP2Q684P5 730 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 C8orf82Q6P1X6 216 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 TMEM207Q6UWW9 146 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ERMP1Q7Z2K6 904 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 AMIGO2Q86SJ2 522 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CARM1Q86X55 608 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MIB1Q86YT6 1006 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CAMK1DQ8IU85 385 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 AQP12AQ8IXF9 295 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ZNF683Q8IZ20 524 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 FBXO39Q8N4B4 442 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MINDY1Q8N5J2 469 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ANKFN1Q8N957 763 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SNX31Q8N9S9 440 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TNIP2Q8NFZ5 429 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 OR4L1Q8NH43 312 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ZFP28Q8NHY6 868 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ARRDC2Q8TBH0 407 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 STAG3L4Q8TBR4 150 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 HM13Q8TCT9 377 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 BRSK1Q8TDC3 778 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 FBXO32Q969P5 355 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SLCO4A1Q96BD0 722 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 PTERQ96BW5 349 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 DNAJC1Q96KC8 554 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 SLC39A3Q9BRY0 314 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MUC13Q9H3R2 512 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 IL1RL2Q9HB29 575 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 GPBP1L1Q9HC44 474 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 FBRSL1Q9HCM7 1045 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 C8orf4Q9NR00 106 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TAS2R13Q9NYV9 303 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MARCH2Q9P0N8 246 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ATXN10Q9UBB4 475 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TMCO1Q9UM00 188 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 PCDHGB4Q9UN71 923 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 AURKCQ9UQB9 309 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 FCF1Q9Y324 198 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 KCTD3Q9Y597 815 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 PCDHGB5Q9Y5G0 923 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TANC1Q9C0D5 1861 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 UBA6A0AVT1 1052 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 TTC24A2A3L6 582 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 DYTNA2CJ06 578 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 TYW5A2RUC4 315 aaKnown RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 CCDC162PA2VCL2 907 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 TMEM88BA6NKF7 163 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 PDLIM1O00151 329 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 HTRA2O43464 458 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 PRAMEF11O60813 436 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 KERAO60938 352 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 CLASP2O75122 1294 aaKnown RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 NDUFS3O75489 264 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms