RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 EME1Q96AY2 570 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TMEM18Q96B42 140 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CENPTQ96BT3 561 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 HDAC11Q96DB2 347 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 MSI2Q96DH6 328 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 EGLN2Q96KS0 407 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 RMDN2Q96LZ7 410 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CDRT15Q96T59 188 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 AGAP2Q99490 1192 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 FAM118BQ9BPY3 351 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 GPATCH1Q9BRR8 931 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 SYT17Q9BSW7 474 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 DESI2Q9BSY9 194 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 SLC25A23Q9BV35 468 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ZNF747Q9BV97 191 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TEX13AQ9BXU3 409 aaPredicted RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 RTN4RQ9BZR6 473 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 NPFFR1Q9GZQ6 430 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 SPATC1LQ9H0A9 340 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 C2orf40Q9H1Z8 148 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ST6GALNAC4Q9H4F1 302 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 KLHL31Q9H511 634 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 THSD1Q9NS62 852 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CYSLTR2Q9NS75 346 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 SEMA4GQ9NTN9 838 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TMEM45AQ9NWC5 275 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 COMMD8Q9NX08 183 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CISD1Q9NZ45 108 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 EPS15L1Q9UBC2 864 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 UBA2Q9UBT2 640 aaPredicted RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 DNAJB4Q9UDY4 337 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 WBP11Q9Y2W2 641 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CLIC4Q9Y696 253 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 STON1Q9Y6Q2 735 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ARHGEF40Q8TER5 1519 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 PIK3R4Q99570 1358 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 WDR17Q8IZU2 1322 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 KANSL1LA0AUZ9 987 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 LINC01548A6NM66 108 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 STMND1H3BQB6 276 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 VCYO14598 125 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MAP2K7O14733 419 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SMAD9O15198 467 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 DIAPH2O60879 1101 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 PROP1O75360 226 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 E2F6O75461 281 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TADA2AO75478 443 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 BCL10O95999 233 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 PRLRP16471 622 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 DDX5P17844 614 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 UBA1P22314 1058 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SP100P23497 879 aaPredicted RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 GPTP24298 496 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 HOXC8P31273 242 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MC5RP33032 325 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 AVPR1AP37288 418 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 CCR10P46092 362 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 CDH12P55289 794 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TMPRSS3P57727 454 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 GHRHRQ02643 423 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SREBF2Q12772 1141 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 GRSF1Q12849 480 aaKnown RBP eCLIP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 NEDD9Q14511 834 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TNIP1Q15025 636 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 E2F5Q15329 346 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TAF7Q15545 349 aaPredicted RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SNAPC1Q16533 368 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 HYAL4Q2M3T9 481 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SMTNL2Q2TAL5 461 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 CBWD6Q4V339 395 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 CBWD3Q5JTY5 395 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 PIK3CD-AS1Q5SR53 167 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 C6orf10Q5SRN2 563 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 ARMC4Q5T2S8 1044 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SIGIRRQ6IA17 410 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 METTL2BQ6P1Q9 378 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TMEM71Q6P5X7 295 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SHQ1Q6PI26 577 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TRAT1Q6PIZ9 186 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 ZNF793Q6ZN11 406 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MTSS1LQ765P7 747 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 GLRX5Q86SX6 157 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 PATL1Q86TB9 770 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 IQCHQ86VS3 1027 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MB21D2Q8IYB1 491 aaPredicted RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SAMD14Q8IZD0 417 aaPredicted RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 PI4KAP1Q8N8J0 262 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TEX45Q8NA69 505 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SLC44A5Q8NCS7 719 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MSANTD4Q8NCY6 345 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 AGBL3Q8NEM8 1001 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SEMA6DQ8NFY4 1073 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 OR10S1Q8NGN2 331 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TMEM163Q8TC26 289 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TEKT4Q8WW24 435 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 IGFBPL1Q8WX77 278 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 TEKT1Q969V4 418 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 ARSGQ96EG1 525 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 METTL2AQ96IZ6 378 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 ZNF396Q96N95 335 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms