RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 CTPS1P17812 591 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 GABRG2P18507 467 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 NDUFV2P19404 249 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 C5AR1P21730 350 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 LHCGRP22888 699 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 MMP12P39900 470 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 ELK3P41970 407 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 ABL2P42684 1182 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 NEK3P51956 506 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 EPHB1P54762 984 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 POLR2LP62875 67 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 ZBTB16Q05516 673 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 CNTN1Q12860 1018 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 GRIK2Q13002 908 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 PTPRRQ15256 657 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 CDKN3Q16667 212 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 CCDC38Q502W7 563 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 LRRC73Q5JTD7 316 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 PIP5KL1Q5T9C9 394 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 DBX2Q6ZNG2 339 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 LRRC69Q6ZNQ3 347 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 USP45Q70EL2 814 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 CACUL1Q86Y37 369 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 TMPRSS6Q8IU80 811 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 ZBED8Q8IZ13 594 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 TTC30BQ8N4P2 665 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 FBXO36Q8NEA4 188 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 BLOC1S5Q8TDH9 187 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 PTCD2Q8WV60 388 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 HMGB4Q8WW32 186 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 STAMBPL1Q96FJ0 436 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 SCRN2Q96FV2 425 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 WBP1Q96G27 269 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 MRGPRX1Q96LB2 322 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 EBNA1BP2Q99848 306 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 TRIM56Q9BRZ2 755 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 KIFC1Q9BW19 673 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 SLC6A17Q9H1V8 727 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 MRM3Q9HC36 420 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 MAGEE1Q9HCI5 957 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 PCDH12Q9NPG4 1184 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 HACD3Q9P035 362 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 SERGEFQ9UGK8 458 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 SOX13Q9UN79 622 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 CHMP2BQ9UQN3 213 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 ZNF711Q9Y462 761 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 TCAF1Q9Y4C2 921 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 NUMA1Q14980 2115 aa11.72□□□□□ -0.53
MTHFD1-211ENST00000555709 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 HEATR9A2RTY3 570 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 MROH6A6NGR9 719 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 PLK4O00444 970 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 AURKAO14965 403 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 AREL1O15033 823 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 LDB2O43679 373 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 ZNF883P0CG24 379 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 ADRB3P13945 408 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 PGAM1P18669 254 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 ADRA1DP25100 572 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 HNF1BP35680 557 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 MAGEA4P43358 317 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 SUOXP51687 545 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 ZNF140P52738 457 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 RALGDSQ12967 914 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 SLMAPQ14BN4 828 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 MAP9Q49MG5 647 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 PCID2Q5JVF3 399 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 HP1BP3Q5SSJ5 553 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 UBAP2Q5T6F2 1119 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 AGBL4Q5VU57 503 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 STEAP4Q687X5 459 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 SLC36A4Q6YBV0 504 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 ERN2Q76MJ5 926 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 DPPA4Q7L190 304 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 ANKMY2Q8IV38 441 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 PAF1Q8N7H5 531 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 PPHLN1Q8NEY8 458 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 BRSK1Q8TDC3 778 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 SETD7Q8WTS6 366 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 SRPK1Q96SB4 655 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 EPB41L4BQ9H329 900 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 CDC42EP4Q9H3Q1 356 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 TRABDQ9H4I3 376 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 IL21RQ9HBE5 538 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 TREX1Q9NSU2 369 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 NINJ2Q9NZG7 142 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 B4GALT6Q9UBX8 382 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 SCML1Q9UN30 329 aa11.71□□□□□ -0.53
MTHFD1-211ENST00000555709 PLXNA2O75051 1894 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 KNL1Q8NG31 2342 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 IGHV1OR15-9A0A0B4J2B8 117 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 A0A0U1RQS6 177 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 FAM237BA0A1B0GVD1 139 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 ERLIN1O75477 346 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 DNTTP04053 509 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 PSMA3P25788 255 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 VIPR1P32241 457 aa11.7□□□□□ -0.54
MTHFD1-211ENST00000555709 CSRP3P50461 194 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms