RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CCDC50Q8IVM0 306 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 RAVER1Q8IY67 606 aaKnown RBP24.32■■□□□ 1.48
PRKCH-216ENST00000555542 CCDC170Q8IYT3 715 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 SLC46A1Q96NT5 459 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 GOLPH3Q9H4A6 298 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 ATXN7L1Q9ULK2 861 aaPredicted RBP24.32■■□□□ 1.48
PRKCH-216ENST00000555542 ALG6Q9Y672 507 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 A0A1W2PNU3 283 aaPredicted RBP24.31■■□□□ 1.48
PRKCH-216ENST00000555542 ZW10O43264 779 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 CST8O60676 142 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 TNFSF15O95150 251 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 FGF1P05230 155 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 CDKN2BP42772 138 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 NR2C2P49116 596 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 SPINT3P49223 89 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 MAP9Q49MG5 647 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 IGF2-ASQ6U949 168 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 SPOCD1Q6ZMY3 1216 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 TFB1MQ8WVM0 346 aaKnown RBP24.31■■□□□ 1.48
PRKCH-216ENST00000555542 IMP4Q96G21 291 aaKnown RBP24.31■■□□□ 1.48
PRKCH-216ENST00000555542 LIN37Q96GY3 246 aaPredicted RBP24.31■■□□□ 1.48
PRKCH-216ENST00000555542 FCRL3Q96P31 734 aaPredicted RBP24.31■■□□□ 1.48
PRKCH-216ENST00000555542 SLC25A51Q9H1U9 297 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 FAM83DQ9H4H8 585 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 TFR2Q9UP52 801 aa24.31■■□□□ 1.48
PRKCH-216ENST00000555542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.31■■□□□ 1.48
PRKCH-216ENST00000555542 ARHGEF17Q96PE2 2063 aaPredicted RBP24.31■■□□□ 1.48
PRKCH-216ENST00000555542 A0A0A6YYK5 440 aaPredicted RBP24.3■■□□□ 1.48
PRKCH-216ENST00000555542 PMS2P1A4D2B8 440 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 IPO7O95373 1038 aaKnown RBP24.3■■□□□ 1.48
PRKCH-216ENST00000555542 ECEL1O95672 775 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 HADHBP55084 474 aaKnown RBP24.3■■□□□ 1.48
PRKCH-216ENST00000555542 TLE3Q04726 772 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 EIF3IQ13347 325 aaKnown RBP24.3■■□□□ 1.48
PRKCH-216ENST00000555542 KIF26BQ2KJY2 2108 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 CCDC70Q6NSX1 233 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 RAB11FIP2Q7L804 512 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 LYSMD3Q7Z3D4 306 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 FBXO39Q8N4B4 442 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 ZFYVE1Q9HBF4 777 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 SAE1Q9UBE0 346 aaPredicted RBP24.3■■□□□ 1.48
PRKCH-216ENST00000555542 ZNHIT2Q9UHR6 403 aa24.3■■□□□ 1.48
PRKCH-216ENST00000555542 AGRPO00253 132 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 PLD2O14939 933 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 ALDH4A1P30038 563 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 AMZ1Q400G9 498 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 TFDP3Q5H9I0 405 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 P3H4Q92791 437 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 WDR70Q9NW82 654 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 SHOC2Q9UQ13 582 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 PLEKHM1Q9Y4G2 1056 aa24.29■■□□□ 1.48
PRKCH-216ENST00000555542 RGSL1A5PLK6 1076 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 EIF4E1BA6NMX2 242 aaKnown RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 KLK10O43240 276 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 ZRANB2O95218 330 aaKnown RBP eCLIP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 LCA5LO95447 670 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 ATP1A1P05023 1023 aaKnown RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 PIRTP0C851 137 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 JMJD7P0C870 316 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 HOXB3P14651 431 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 PECAM1P16284 738 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 TNNT3P45378 269 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 PPM1FP49593 454 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 ZNF75DP51815 510 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 CXADRP78310 365 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 CDK18Q07002 472 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 PYCR3Q53H96 274 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 TEX44Q53QW1 395 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 ALS2CLQ60I27 953 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 DAAM2Q86T65 1068 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 JAMLQ86YT9 394 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 SPATA22Q8NHS9 363 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 PATE1Q8WXA2 126 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 CCDC97Q96F63 343 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 SCARF2Q96GP6 870 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 PRR11Q96HE9 360 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-216ENST00000555542 COX14Q96I36 57 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 SPATA16Q9BXB7 569 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 GPR63Q9BZJ6 419 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 GLOD4Q9HC38 313 aa24.28■■□□□ 1.48
PRKCH-216ENST00000555542 PMPCBO75439 489 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 MT-CYBP00156 380 aaPredicted RBP24.27■■□□□ 1.48
PRKCH-216ENST00000555542 ITGA2BP08514 1039 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 PTPN3P26045 913 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 CCKBRP32239 447 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 MLLT3P42568 568 aaPredicted RBP24.27■■□□□ 1.48
PRKCH-216ENST00000555542 NAP1L1P55209 391 aaKnown RBP24.27■■□□□ 1.48
PRKCH-216ENST00000555542 OR1D5P58170 312 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 LRP8Q14114 963 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 PRKD1Q15139 912 aaPredicted RBP24.27■■□□□ 1.48
PRKCH-216ENST00000555542 PHF19Q5T6S3 580 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 HENMT1Q5T8I9 393 aaKnown RBP24.27■■□□□ 1.48
PRKCH-216ENST00000555542 C11orf63Q6NUN7 778 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 ZC3H18Q86VM9 953 aaKnown RBP24.27■■□□□ 1.48
PRKCH-216ENST00000555542 KATNAL2Q8IYT4 538 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 RCOR2Q8IZ40 523 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 HAUS1Q96CS2 278 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 RBM41Q96IZ5 413 aaKnown RBP24.27■■□□□ 1.48
PRKCH-216ENST00000555542 TRIB3Q96RU7 358 aa24.27■■□□□ 1.48
PRKCH-216ENST00000555542 ZMYND15Q9H091 742 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms