RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 IFI44Q8TCB0 444 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ATG4AQ8WYN0 398 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 COX14Q96I36 57 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 TSGA10Q9BZW7 698 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 FAM83DQ9H4H8 585 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 CARS2Q9HA77 564 aaKnown RBP13.6□□□□□ -0.23
SNX6-203ENST00000555416 ZFYVE1Q9HBF4 777 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ARFGAP3Q9NP61 516 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 KCTD5Q9NXV2 234 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 GULP1Q9UBP9 304 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 RABGEF1Q9UJ41 708 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 TRHDEQ9UKU6 1024 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 DNPEPQ9ULA0 475 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 GPR34Q9UPC5 381 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 MYLKQ15746 1914 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 COL27A1Q8IZC6 1860 aaPredicted RBP13.59□□□□□ -0.23
SNX6-203ENST00000555416 BUD23O43709 281 aaKnown RBP13.59□□□□□ -0.23
SNX6-203ENST00000555416 KRT86O43790 486 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 OPA1O60313 960 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 PROS1P07225 676 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 BPIP17213 487 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 KELP23276 732 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 AK4P27144 223 aaPredicted RBP13.59□□□□□ -0.23
SNX6-203ENST00000555416 ADRA1AP35348 466 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 CETN2P41208 172 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 GNPDA1P46926 289 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 GDF10P55107 478 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 TARDBPQ13148 414 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNX6-203ENST00000555416 NR0B2Q15466 257 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 SLC1A5Q15758 541 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 MEI1Q5TIA1 1274 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 ZNF662Q6ZS27 426 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 MARK2Q7KZI7 788 aaKnown RBP13.59□□□□□ -0.23
SNX6-203ENST00000555416 TAF8Q7Z7C8 310 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 TMPRSS12Q86WS5 348 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 GALNT15Q8N3T1 639 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 FAM71DQ8N9W8 422 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 SLC35B2Q8TB61 432 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 GPBAR1Q8TDU6 330 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 SCARF2Q96GP6 870 aaPredicted RBP13.59□□□□□ -0.23
SNX6-203ENST00000555416 HIC2Q96JB3 615 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 SPATA13Q96N96 652 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 APOL2Q9BQE5 337 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 FICDQ9BVA6 458 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 GPR63Q9BZJ6 419 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 BPIFA1Q9NP55 256 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 SPATS2LQ9NUQ6 558 aaKnown RBP13.59□□□□□ -0.23
SNX6-203ENST00000555416 TMPRSS11EQ9UL52 423 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 PADI4Q9UM07 663 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 PPP2R2CQ9Y2T4 447 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 PRKAB1Q9Y478 270 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 SCN8AQ9UQD0 1980 aa13.59□□□□□ -0.23
SNX6-203ENST00000555416 ARHGEF17Q96PE2 2063 aaPredicted RBP13.59□□□□□ -0.23
SNX6-203ENST00000555416 EME2A4GXA9 379 aaPredicted RBP13.58□□□□□ -0.24
SNX6-203ENST00000555416 TRABD2BA6NFA1 517 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 TAF4O00268 1085 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 PDE2AO00408 941 aaPredicted RBP13.58□□□□□ -0.24
SNX6-203ENST00000555416 NOBOXO60393 691 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 DNAJC6O75061 913 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 EPOP01588 193 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 IVLP07476 585 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 CCDC175P0C221 793 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 JUPP14923 745 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 CA5AP35218 305 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 ADCY8P40145 1251 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 MPP3Q13368 585 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 SPARCL1Q14515 664 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 PTPRCAPQ14761 206 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 ST3GAL2Q16842 350 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 CDCP2Q5VXM1 449 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 LVRNQ6Q4G3 990 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 GKN2Q86XP6 184 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 FAM46DQ8NEK8 389 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 GPR156Q8NFN8 814 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 MDM1Q8TC05 714 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 CCHCR1Q8TD31 782 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 TMEM121Q9BTD3 319 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 PKD2L2Q9NZM6 624 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 DOLKQ9UPQ8 538 aa13.58□□□□□ -0.24
SNX6-203ENST00000555416 KMT2BQ9UMN6 2715 aaPredicted RBP13.58□□□□□ -0.24
SNX6-203ENST00000555416 BPTFQ12830 3046 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 GOLGA6L3A6NEY3 463 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 GPR39O43194 453 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 USP12O75317 370 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 METTL18O95568 372 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 MT-CO3P00414 261 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 DUSP3P51452 185 aaPredicted RBP13.57□□□□□ -0.24
SNX6-203ENST00000555416 GEMP55040 296 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 CTBSQ01459 385 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 MSLNQ13421 630 aaPredicted RBP13.57□□□□□ -0.24
SNX6-203ENST00000555416 KCTD19Q17RG1 926 aaPredicted RBP13.57□□□□□ -0.24
SNX6-203ENST00000555416 KHDC1Q4VXA5 237 aaKnown RBP13.57□□□□□ -0.24
SNX6-203ENST00000555416 PYCR3Q53H96 274 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 DENND5AQ6IQ26 1287 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 OGFOD3Q6PK18 319 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 RANBP10Q6VN20 620 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 RAVER1Q8IY67 606 aaKnown RBP13.57□□□□□ -0.24
SNX6-203ENST00000555416 TAB3Q8N5C8 712 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms