RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 HMGB1P1B2RPK0 211 aaPredicted RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 RECQL5O94762 991 aaPredicted RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 PCCBP05166 539 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 NFKBIAP25963 317 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 VIPR1P32241 457 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 CA5AP35218 305 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 HMGCLP35914 325 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 ARCN1P48444 511 aaKnown RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 CSNK1DP48730 415 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 ZNF284Q2VY69 593 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 ATP13A5Q4VNC0 1218 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 SETMARQ53H47 684 aaPredicted RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 STEAP4Q687X5 459 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 SEL1L3Q68CR1 1132 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 ADGRD1Q6QNK2 874 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 PIM3Q86V86 326 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 FAM167BQ9BTA0 163 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 NLE1Q9NVX2 485 aaPredicted RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 PKD2L2Q9NZM6 624 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 DOCK9Q9BZ29 2069 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 MROH6A6NGR9 719 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 OR2AG2A6NM03 316 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 SPAM1P38567 509 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 ZNF140P52738 457 aaPredicted RBP10.15□□□□□ -0.78
NEK9-205ENST00000555405 MSLNQ13421 630 aaPredicted RBP10.15□□□□□ -0.78
NEK9-205ENST00000555405 LAMB3Q13751 1172 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 RALGPS1Q5JS13 557 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 HHATQ5VTY9 493 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 AADATQ8N5Z0 425 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 FAM160A2Q8N612 972 aaPredicted RBP10.15□□□□□ -0.78
NEK9-205ENST00000555405 FRMD1Q8N878 549 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 PKNOX2Q96KN3 472 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 CPNE1Q99829 537 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 OSBPL1AQ9BXW6 950 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 CYP8B1Q9UNU6 501 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 CA5BQ9Y2D0 317 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 PRKAB1Q9Y478 270 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 TICRRQ7Z2Z1 1910 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 SLC7A4O43246 635 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 SLC25A14O95258 325 aaPredicted RBP10.15□□□□□ -0.78
NEK9-205ENST00000555405 PDGFBP01127 241 aaPredicted RBP10.15□□□□□ -0.78
NEK9-205ENST00000555405 C1SP09871 688 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 GPR1P46091 355 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 TAS2R39P59534 338 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 SGCGQ13326 291 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 CSHL1Q14406 222 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 AFTPHQ6ULP2 937 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 LIPIQ6XZB0 460 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 RD3Q7Z3Z2 195 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 MTERF4Q7Z6M4 381 aaKnown RBP10.15□□□□□ -0.78
NEK9-205ENST00000555405 OR2T3Q8NH03 318 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 DNASE1L2Q92874 299 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 TSNARE1Q96NA8 513 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 FAM111AQ96PZ2 611 aa10.15□□□□□ -0.78
NEK9-205ENST00000555405 A0A096LPK6 155 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 NIPSNAP2O75323 286 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 GSTA2P09210 222 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 C6P13671 934 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 PPP2R2AP63151 447 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 IRF9Q00978 393 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 PEX6Q13608 980 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 GRTP1Q5TC63 336 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 CROCCP2Q86T23 111 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 TRABD2AQ86V40 505 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 CILP2Q8IUL8 1156 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 PTCD2Q8WV60 388 aaKnown RBP10.15□□□□□ -0.79
NEK9-205ENST00000555405 THOC1Q96FV9 657 aaKnown RBP10.15□□□□□ -0.79
NEK9-205ENST00000555405 DCUN1D1Q96GG9 259 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 TBC1D17Q9HA65 648 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 ABCF3Q9NUQ8 709 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 INTS9Q9NV88 658 aaKnown RBP10.15□□□□□ -0.79
NEK9-205ENST00000555405 NCKAP1Q9Y2A7 1128 aa10.15□□□□□ -0.79
NEK9-205ENST00000555405 GPR179Q6PRD1 2367 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 MAN2B1O00754 1011 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 CHN1P15882 459 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 RPA3P35244 121 aaPredicted RBP10.14□□□□□ -0.79
NEK9-205ENST00000555405 SPINT3P49223 89 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 TTC31Q49AM3 519 aaPredicted RBP10.14□□□□□ -0.79
NEK9-205ENST00000555405 SPDYCQ5MJ68 293 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 ZC3HC1Q86WB0 502 aaKnown RBP10.14□□□□□ -0.79
NEK9-205ENST00000555405 PELI3Q8N2H9 469 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 ARMC2Q8NEN0 867 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 TSTD1Q8NFU3 115 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 CFAP61Q8NHU2 1237 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 RBBP8Q99708 897 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 SH3GL2Q99962 352 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 CLPBQ9H078 707 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 SNX15Q9NRS6 342 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 SLC17A7Q9P2U7 560 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 DUSP12Q9UNI6 340 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 MRPS17Q9Y2R5 130 aaKnown RBP10.14□□□□□ -0.79
NEK9-205ENST00000555405 K7ESM1 405 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 WNT9AO14904 365 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 FSBPO95073 299 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 NDUFV2P19404 249 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 ITGB7P26010 798 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 ACSL1P33121 698 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 SERPINB9P50453 376 aa10.14□□□□□ -0.79
NEK9-205ENST00000555405 RPS14P62263 151 aaKnown RBP10.14□□□□□ -0.79
NEK9-205ENST00000555405 PDAP1Q13442 181 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms