RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CEP192Q8TEP8 1941 aa12.62□□□□□ -0.39
SYNE2-219ENST00000555323 SPAG17Q6Q759 2223 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 LRRK1Q38SD2 2015 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 GLYATL1P3A0A0U1RQE8 302 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 ESYT3A0FGR9 886 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 A6NNZ2 444 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 FADS2P1A8MWK0 482 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 H0Y8X5 98 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 TLR4O00206 839 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 SRP72O76094 671 aaKnown RBP12.61□□□□□ -0.39
SYNE2-219ENST00000555323 USP1O94782 785 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 NMBRP28336 390 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 ECHS1P30084 290 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 GPR1P46091 355 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 ARSDP51689 593 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 NHLH1Q02575 133 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 CUL1Q13616 776 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 SEPT6Q14141 434 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 Q6ZSR6 202 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 IFT20Q8IY31 132 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 ZNF398Q8TD17 642 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 SKA1Q96BD8 255 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 MFSD3Q96ES6 412 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 KLHDC7BQ96G42 594 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 COX14Q96I36 57 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 PWWP2AQ96N64 755 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 CAPN10Q9HC96 672 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 AASDHPPTQ9NRN7 309 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 SMOXQ9NWM0 555 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 FKBPLQ9UIM3 349 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 CA5BQ9Y2D0 317 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 FAM169AQ9Y6X4 670 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 SDK1Q7Z5N4 2213 aa12.61□□□□□ -0.39
SYNE2-219ENST00000555323 ZCWPW2A0A1B0GU75 182 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 LRP3O75074 770 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 TTC4O95801 387 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 SLC4A1P02730 911 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 PCCBP05166 539 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 RHOXF2BP0C7M4 288 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 ZNF806P0C7X5 589 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 MPLP40238 635 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 ARCN1P48444 511 aaKnown RBP12.6□□□□□ -0.39
SYNE2-219ENST00000555323 CARSP49589 748 aaKnown RBP12.6□□□□□ -0.39
SYNE2-219ENST00000555323 CSNK1EP49674 416 aaKnown RBP12.6□□□□□ -0.39
SYNE2-219ENST00000555323 KIAA1024LP59773 190 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 CDK3Q00526 305 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 ITGA9Q13797 1035 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 PTK2BQ14289 1009 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 TEAD4Q15561 434 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 CHRNA6Q15825 494 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 GPR33Q49SQ1 333 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 ANKRD20A4Q4UJ75 823 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 ATP13A5Q4VNC0 1218 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 RAET1GQ6H3X3 334 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 CENPUQ71F23 418 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 SNX20Q7Z614 316 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 RELL1Q8IUW5 271 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 OR13H1Q8NG92 308 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 BTN2A2Q8WVV5 523 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 RUBCNQ92622 972 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 HDAC10Q969S8 669 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 FUBP1Q96AE4 644 aaKnown RBP12.6□□□□□ -0.39
SYNE2-219ENST00000555323 STAMBPL1Q96FJ0 436 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 FCRL3Q96P31 734 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-219ENST00000555323 MYOCQ99972 504 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 RHOXF2Q9BQY4 288 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 WDR83Q9BRX9 315 aaKnown RBP12.6□□□□□ -0.39
SYNE2-219ENST00000555323 LGR4Q9BXB1 951 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 SPATA16Q9BXB7 569 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 ERVMER34-1Q9H9K5 563 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 SLC2A6Q9UGQ3 507 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 GMEB2Q9UKD1 530 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 TMPRSS11EQ9UL52 423 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 SLC6A14Q9UN76 642 aa12.6□□□□□ -0.39
SYNE2-219ENST00000555323 TNRC6BQ9UPQ9 1833 aaKnown RBP12.6□□□□□ -0.39
SYNE2-219ENST00000555323 TRBV5-4A0A0C4DH59 114 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 SPTY2D1-AS1A0A0U1RR47 76 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 CCDC162PA2VCL2 907 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 TNFRSF10CO14798 259 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A9O60656 530 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 PRAMEF1O95521 474 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 POLBP06746 335 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 THEGLP0DJG4 465 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 MYCLP1P12525 358 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 PGAM1P18669 254 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A6P19224 532 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A1P22309 533 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A4P22310 534 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 ARNTP27540 789 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 MC4RP32245 332 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A3P35503 534 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A5P35504 534 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 ELK3P41970 407 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 NXPH1P58417 271 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 TMPRSS15P98073 1019 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms