RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PKP3Q9Y446 797 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 AKAP13Q12802 2813 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 ARHGEF17Q96PE2 2063 aaPredicted RBP12.03□□□□□ -0.48
SRP54-206ENST00000555317 YY2O15391 372 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 LIASO43766 372 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 KIF5CO60282 957 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 CEP104O60308 925 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 IFNB1P01574 187 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 FGGP02679 453 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 ACP1P24666 158 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 STIP1P31948 543 aaKnown RBP12.03□□□□□ -0.48
SRP54-206ENST00000555317 CHRNA4P43681 627 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 LMAN1P49257 510 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 DCDC1P59894 354 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 SNX1Q13596 522 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 CDKN3Q16667 212 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 LONRF2Q1L5Z9 754 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 PARP6Q2NL67 630 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 C6orf132Q5T0Z8 1188 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 HENMT1Q5T8I9 393 aaKnown RBP12.03□□□□□ -0.48
SRP54-206ENST00000555317 DHRS13Q6UX07 377 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 TMC3Q7Z5M5 1100 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 TRIM74Q86UV6 250 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 GALNT13Q8IUC8 556 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 ARL10Q8N8L6 244 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 SLC35B2Q8TB61 432 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 C1orf54Q8WWF1 131 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 GSDMCQ9BYG8 508 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 FRMD8Q9BZ67 464 aaPredicted RBP12.03□□□□□ -0.48
SRP54-206ENST00000555317 CLPBQ9H078 707 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 ABCG4Q9H172 646 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 CAAP1Q9H8G2 361 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 SIRPGQ9P1W8 387 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 GULP1Q9UBP9 304 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 SUFUQ9UMX1 484 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 ZKSCAN5Q9Y2L8 839 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 TMEM98Q9Y2Y6 226 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 JRKLQ9Y4A0 524 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 GPSM3Q9Y4H4 160 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 NEUROG3Q9Y4Z2 214 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 SPO11Q9Y5K1 396 aa12.03□□□□□ -0.48
SRP54-206ENST00000555317 MAP1BP46821 2468 aaKnown RBP12.02□□□□□ -0.48
SRP54-206ENST00000555317 ASXL3Q9C0F0 2248 aa12.02□□□□□ -0.48
SRP54-206ENST00000555317 EPG5Q9HCE0 2579 aa12.02□□□□□ -0.48
SRP54-206ENST00000555317 SPEGQ15772 3267 aa12.02□□□□□ -0.48
SRP54-206ENST00000555317 PTPRBP23467 1997 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 SCN8AQ9UQD0 1980 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 CPED1A4D0V7 1026 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 C2orf81A6NN90 581 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 E7EVH7 732 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 PSMD3O43242 534 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 SLC25A14O95258 325 aaPredicted RBP12.02□□□□□ -0.49
SRP54-206ENST00000555317 SOD1P00441 154 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 AGTP01019 485 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 CEACAM5P06731 702 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 IVLP07476 585 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 CELA2BP08218 269 aaPredicted RBP12.02□□□□□ -0.49
SRP54-206ENST00000555317 SPINK2P20155 84 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 HMGCLP35914 325 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 PDE1BQ01064 536 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 E2F1Q01094 437 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 BIRC2Q13490 618 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 PDPK2PQ6A1A2 396 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 MARK2Q7KZI7 788 aaKnown RBP12.02□□□□□ -0.49
SRP54-206ENST00000555317 GSTA5Q7RTV2 222 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 PHYKPLQ8IUZ5 450 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 TRAM1L1Q8N609 369 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 FAM46DQ8NEK8 389 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 GDAP1Q8TB36 358 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 IFI44Q8TCB0 444 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 NAT6Q93015 286 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 PLEKHG4BQ96PX9 1271 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 OR2M4Q96R27 311 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 AGAP2Q99490 1192 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 APOL2Q9BQE5 337 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 BOCQ9BWV1 1114 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 TLR10Q9BXR5 811 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 TMEM168Q9H0V1 697 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 LRRC40Q9H9A6 602 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 BPIFA1Q9NP55 256 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 HOMER3Q9NSC5 361 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 TRMT1Q9NXH9 659 aaKnown RBP12.02□□□□□ -0.49
SRP54-206ENST00000555317 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.02□□□□□ -0.49
SRP54-206ENST00000555317 NFKBIL1Q9UBC1 381 aaPredicted RBP12.02□□□□□ -0.49
SRP54-206ENST00000555317 FEZ2Q9UHY8 353 aaPredicted RBP12.02□□□□□ -0.49
SRP54-206ENST00000555317 KLK13Q9UKR3 277 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 SLC17A4Q9Y2C5 497 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 RP1P56715 2156 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 FRYQ5TBA9 3013 aa12.02□□□□□ -0.49
SRP54-206ENST00000555317 ZFC3H1O60293 1989 aaKnown RBP12.01□□□□□ -0.49
SRP54-206ENST00000555317 B4DGG1 531 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 AURKAO14965 403 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 STX7O15400 261 aaKnown RBP12.01□□□□□ -0.49
SRP54-206ENST00000555317 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 CRTAMO95727 393 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 TOP3BO95985 862 aaKnown RBP12.01□□□□□ -0.49
SRP54-206ENST00000555317 GAS8O95995 478 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 GP1BAP07359 652 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 GIMD1P0DJR0 217 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 BPIP17213 487 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms