RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 DCP2Q8IU60 420 aaKnown RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SYT12Q8IV01 421 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 MFSD2AQ8NA29 543 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 FBXO36Q8NEA4 188 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SKA1Q96BD8 255 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 MFSD3Q96ES6 412 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 TBATAQ96M53 351 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SPATA16Q9BXB7 569 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SAYSD1Q9NPB0 183 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 MBNL1Q9NR56 388 aaKnown RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SMOXQ9NWM0 555 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 PILRBQ9UKJ0 227 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 CHMP2BQ9UQN3 213 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 HCN4Q9Y3Q4 1203 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SLC30A1Q9Y6M5 507 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 FAM169AQ9Y6X4 670 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SCN8AQ9UQD0 1980 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 MUC6Q6W4X9 2439 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 A0A1B0GTW7 788 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ZCWPW2A0A1B0GU75 182 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 GAPDHSO14556 408 aaPredicted RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 BCAT2O15382 392 aaPredicted RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 PRAMEF1O95521 474 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SOD1P00441 154 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 GSTA2P09210 222 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ITGALP20701 1170 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ITPKAP23677 461 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 CD38P28907 300 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 NBL1P41271 181 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 RABIFP47224 123 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 AFF3P51826 1226 aaKnown RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 PFN3P60673 137 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 NFATC2Q13469 925 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 PEX6Q13608 980 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 INPP5AQ14642 412 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 CRYMQ14894 314 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SLMAPQ14BN4 828 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ALS2CLQ60I27 953 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 STEAP4Q687X5 459 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 LAIR1Q6GTX8 287 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 FAM151BQ6UXP7 276 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 GCNT7Q6ZNI0 430 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ARMCX6Q7L4S7 300 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SNX20Q7Z614 316 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 CCDC25Q86WR0 208 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 LMNTD2Q8IXW0 634 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 CEP76Q8TAP6 659 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ZNF398Q8TD17 642 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SCG3Q8WXD2 468 aaKnown RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ATOH1Q92858 354 aaPredicted RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 HDAC10Q969S8 669 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ZNF669Q96BR6 464 aaPredicted RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 BMFQ96LC9 184 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 TEX101Q9BY14 249 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 WDR26Q9H7D7 661 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 TM9SF3Q9HD45 589 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 FZD3Q9NPG1 666 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SLC2A6Q9UGQ3 507 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 PLXNA2O75051 1894 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 GOLGA8CPA6NN73 597 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 BANF1O75531 89 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 SPAG6O75602 509 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 EPN2O95208 641 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 PCCBP05166 539 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 MAOBP27338 520 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 MC4RP32245 332 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 MAGEA4P43358 317 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 ARSDP51689 593 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 TMPRSS15P98073 1019 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 CACNG1Q06432 222 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 TEAD4Q15561 434 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 CHRNA6Q15825 494 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 LONRF1Q17RB8 773 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 CCNI2Q6ZMN8 369 aaPredicted RBP16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 CYS1Q717R9 158 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 IGDCC3Q8IVU1 814 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 PLA2G15Q8NCC3 412 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 OR6P1Q8NGX9 317 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 OR4L1Q8NH43 312 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 BTN2A2Q8WVV5 523 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 ULK4Q96C45 1275 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 SLC6A18Q96N87 628 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 WDR83Q9BRX9 315 aaKnown RBP16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 MIR1-1HGQ9H1L0 117 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 AASDHPPTQ9NRN7 309 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 PHPT1Q9NRX4 125 aaPredicted RBP16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 GPR27Q9NS67 375 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 SMG5Q9UPR3 1016 aaKnown RBP16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 MYLKQ15746 1914 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 CEP192Q8TEP8 1941 aa16.34■□□□□ 0.21
SPTLC2-203ENST00000554901 ZNF106Q9H2Y7 1883 aaKnown RBP16.33■□□□□ 0.21
SPTLC2-203ENST00000554901 TRBV5-4A0A0C4DH59 114 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 A0A1W2PR77 199 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 CCDC78A2IDD5 438 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 CCDC162PA2VCL2 907 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 POM121BA6NF01 834 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 K7ESM1 405 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms